Pseudomonas sp. KUIN-1: KUIN1_41600
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Entry
KUIN1_41600 CDS
T09878
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psku
Pseudomonas sp. KUIN-1
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psku03016
]
KUIN1_41600 (truB)
Enzymes [BR:
psku01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KUIN1_41600 (truB)
Transfer RNA biogenesis [BR:
psku03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KUIN1_41600 (truB)
Prokaryotic type
KUIN1_41600 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
BBN64970
LinkDB
All DBs
Position
complement(4843210..4844127)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKSYETLAQLGKTTTTADSEGEVLLTRPVTVGRDDIEAALPHFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLSVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFTLAQTVTLEELEQVHADGGNEAVDRFLMPSDS
GLLDWPLLKFSEHSSFYWLHGQPVRAPDAPKFGMVRVQDHEGRFIGIGEVAEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatacgccgcaatgtcagcgggatcatcctgctcgacaagccg
ctgggtttcacttccaacgccgctctgcaaaaggttcgctggctgctcaatgccgagaaa
gccgggcacaccggcagcctcgatcctctggcaacgggcgttctgccgttgtgttttggt
gaagcgaccaagttctctcagtacctgctcgattcggacaagtcctacgagaccctggcg
caactgggcaagaccactaccactgccgactctgaaggcgaggttttgctcacgcgtccg
gtgaccgttggtcgcgacgatatcgaagcggctctgccgcattttcgcggacaaatcagc
cagatacctcccatgtactcggccctcaagcgtgatggccagccactttacaagctggca
cgtgcaggggaagtagtggagcgcgagccccgttctgttactattgcgcgcctggaatta
cttgcttgcgaaggtgacacagcacgtctgtccgtcgattgcagcaaaggcacctatatc
cgcacgctggtcgaggatatcggtgagaagcttggttgtggtgcttacgtcgcagagctg
cgtcgtacccaggccgggcctttcacgctggctcagacagtgacgctggaagagctcgag
caggtgcatgccgacggcggcaatgaagcggttgaccgtttcctcatgccatcggacagc
ggtctgctggactggccgctgttgaagttttcggaacacagttcgttttactggttgcat
ggtcagccagtacgcgcgccggacgcaccgaaattcggtatggttcgcgtgcaggatcac
gaaggtcgcttcatcggtatcggtgaagtcgccgaagacgggcgcattgcgccgcgtcgc
ctgattcggtcagagtga
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