Pseudomonas sp. KUIN-1: KUIN1_42750
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Entry
KUIN1_42750 CDS
T09878
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
psku
Pseudomonas sp. KUIN-1
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psku03400
]
KUIN1_42750 (radA)
DNA repair and recombination proteins [BR:
psku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KUIN1_42750 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_16
RecA
AAA_22
GvpD_P-loop
SLFN-g3_helicase
AAA
Rad51
AAA_24
nSTAND3
AAA_14
NTPase_1
DUF7125
MCM
ABC_tran
zf-C2H2_6
AAA_29
PAXNEB
DUF7129
Motif
Other DBs
NCBI-ProteinID:
BBN65085
LinkDB
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Position
complement(4988016..4989383)
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AA seq
455 aa
AA seq
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MAKAKRLYGCTECGATFPKWAGQCSECGAWNTLVETMIESGAAAPPTGRTGWTGSQAQIR
TLAEVSVEEIPRFSTNSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAQRMP
ALYVTGEESQQQVAMRARRLGLPQDKLRVMTETCIETIIATAKVEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHMSNPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLQIIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaaacgcttgtacggctgcaccgagtgcggcgcgacatttcccaagtgg
gcgggccagtgcagcgaatgcggtgcctggaacacactggtcgagaccatgattgaaagc
ggtgccgccgcgccgcctaccgggcgtaccggctggaccggttcccaagcgcagatcagg
accctggcggaagtcagcgtcgaagaaatcccgcgcttctccaccaactccaccgaactg
gacagggtgctcggcggcggtctggttgacggttcggtggtgctgattggcggcgacccc
ggcatcggcaagtccacgatcctcttgcagacgctgtgcaacatcgcccagcgcatgccc
gcgctgtatgtcaccggtgaggaatcccagcagcaggtcgccatgcgtgcccggcgcctg
gggctgccgcaggacaagctgcgggtaatgaccgaaacctgcatcgagaccatcattgcc
accgccaaggtcgagaagcccaaggtgatggtgatcgattcgatccagacgattttcacc
gaacagctgcagtcggcccctggcggcgtgtcgcaggttcgcgaaagcgccgccttgctg
gtgcgctacgccaagcagagcggtacggcgatcttcctggtcggccacgtcaccaaggaa
ggtgcactggccggcccgcgtgtgcttgagcacatggtcgacaccgtgttgtatttcgag
ggcgaatcggacggccgcctgcgtttgctgcgcgcggtgaagaaccgctttggcgcggtc
aacgagctgggcgtgttcggcatgaccgacaagggcctgaaagaagtctccaacccgtcg
gcgatctttctcacccgtgcgcaggaagaagtaccgggcagtgtggtcatggccacctgg
gagggcacgcggccgatgctggtcgaggtgcaggcgctggtggacgacagtcacatgtcc
aatccgcgccgcgtaacgctgggtctggatcagaatcgtctggccatgttgctggcggtc
ctgcaccgacatggcggcattcccactcacgatcaggacgtgtttctcaacgtggtgggt
ggtgtgaaggtgctggaaaccgcctccgacctggccttgatggcagcggtgatgtccagc
ctgcgcaatcgtccgttgccgcatgacttgctggtgttcggtgaggtggggctgtcgggc
gaagtcaggccggtgcccagcggccaggagcgcctcaaggaggccgccaagcacggcttc
aagcgcgccatcgtgcccaagggcaatgcgccgaaggaagcgccgcccggcttgcagatc
attgccgttacgcgcctggagcaggccctggatgcgctgttcgagtaa
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