Pseudomonas sp. KUIN-1: KUIN1_42990
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Entry
KUIN1_42990 CDS
T09878
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psku
Pseudomonas sp. KUIN-1
Pathway
psku03030
DNA replication
psku03430
Mismatch repair
psku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KUIN1_42990
03430 Mismatch repair
KUIN1_42990
03440 Homologous recombination
KUIN1_42990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psku03032
]
KUIN1_42990
03400 DNA repair and recombination proteins [BR:
psku03400
]
KUIN1_42990
Enzymes [BR:
psku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KUIN1_42990
DNA replication proteins [BR:
psku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KUIN1_42990
DNA repair and recombination proteins [BR:
psku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KUIN1_42990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Ribosomal_L26
Motif
Other DBs
NCBI-ProteinID:
BBN65109
LinkDB
All DBs
Position
complement(5015140..5015754)
Genome browser
AA seq
204 aa
AA seq
DB search
MLERIAVIDFETTGISPGHSCRATEIAVVIMEQGRIVERFQSLMNAGVRIPAFIEGLTGI
SNNMIRTAPSAERVMGDVADFVGSTPLVAHNASFDQKFWDYELSRIQRTREQSFACSLLL
ARRLMPGAPNHKLGTLTRYARLPDTGKAHRAMADAEMAANLTAHLTNELRQTHGISAISH
QMLCSLQKVPAAKISETLKRQRGV
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgttggaacgtattgcagtcatcgactttgaaaccaccggcatctccccgggccatagc
tgccgggcgaccgagattgcggtggtgatcatggagcaggggcgtatcgtcgagcgcttt
cagagcctgatgaatgccggcgtgcgtattcctgcgttcatcgaagggttgaccggcatc
agtaacaacatgattcgtaccgcccccagcgccgagcgggtgatgggcgatgtggcggat
ttcgtcggttcgacaccgctggtggcgcacaacgcctcgttcgaccagaagttctgggac
tacgagctgtcgcgtatccagcgcacgcgcgaacagagcttcgcctgttcactgctgctg
gcccgacgcctgatgcccggcgcaccgaaccacaagctcggcacgttgacccgctatgcg
cgtctgcccgacaccggcaaggctcaccgggcgatggccgatgcggaaatggcggccaac
ctgacggcgcacctgaccaacgaattgcgccagacccacggcatctctgccatctcccac
cagatgctgtgttccctgcagaaagtcccggccgcgaagatcagtgaaaccctgaagcgc
cagcgcggcgtctga
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