Pseudomonas sp. KUIN-1: KUIN1_45220
Help
Entry
KUIN1_45220 CDS
T09878
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
psku
Pseudomonas sp. KUIN-1
Pathway
psku03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KUIN1_45220 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psku03400
]
KUIN1_45220 (uvrA)
DNA repair and recombination proteins [BR:
psku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KUIN1_45220 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KUIN1_45220 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
BCA_ABC_TP_C
AAA_23
RsgA_GTPase
AAA_21
DnaJ_CXXCXGXG
Viral_helicase1
nSTAND3
AAA_25
cobW
Motif
Other DBs
NCBI-ProteinID:
BBN65332
LinkDB
All DBs
Position
5274662..5277496
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPRC
PDHDIPLEAQTVSQMVDLVLTQPEGSKLMLLAPVIRERKGEHLSVFEELRAQGFVRARVN
GKLCELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
PGEEVIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNAELT
LAEGAIRGWDRRNVYYFQMLGSLSKHYGFSLEMPFKQIPADMQKILLNGSGSQSVDFRYL
NESGDIVKRAHPFEGIVPNLERRYRETESATVREELAKFLGTQPCPDCRGTRLRREARHV
WVGEKTLPAVTSLPIGDATHYFETLKLTGRRGEIADKILKEIRERLQFLVNVGLDYLTLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAEGTPDEVMSHPDSLTGKYLSGRVKIAVP
AKRTPRNKKLSLTLKGARGNNLQNVNLDIPIGLLTCVTGVSGSGKSTLINNTLFPLSATA
LNGATTLEAATHDSINGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEVKYK
GKNVHEVLEMTIEEAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSRGGQIIATGTPEQVAEMEQSYTGHYLKPLLTRDKA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagatcctgatacgtggggcacgaacccacaacctgaaaaatattgacctgaca
cttccccgcgacaaactgatcgttatcaccgggctctccggctcaggcaagtcttcgctg
gctttcgatacgctgtacgccgaagggcagcgccgctacgtcgaatcgctgtcggcctat
gcccgccagtttctgtcgatgatggaaaaaccggacgtcgatacgatcgaaggtctgtcg
ccggcgatctccatcgagcagaagtctacttcacataacccgcgctcgaccgtgggtacg
atcaccgaaatttacgactacctgcgtcttctgtatgcgcgcgtcggccagcctcgctgc
cccgaccacgatattccgctggaagcccagactgtcagccagatggtcgacctggtgctg
actcagcctgagggcagcaaattgatgctgcttgcgccggttatccgcgagcgcaagggt
gagcatctttcggtttttgaagagctgcgcgcgcaaggctttgtccgggcgcgagtcaac
ggcaagctgtgcgagctggatgagctgccgaagctggacaagcagaagaagcactcgatc
gatgtggtcgtggaccgtttcaaggtccgcgccgacctgcagcagcgcctggccgagtcc
ttcgagaccgccctgaagctggccgacggtatcgccctggtggcgccgatggacgacgag
ccgggcgaggaagtgatcttctctgcccgcttcgcctgccctatctgtggccatgcgatc
agcgagctggaaccgaagctgttctccttcaacaacccggctggcgcctgcccgacctgc
gacggtctgggcgtgaagcagttcttcgatatcaagcggctggtcaatgccgaactgacg
cttgccgaaggcgcgatacgaggctgggacaggcgtaatgtctattacttccagatgctc
ggctcgctctccaagcactatggcttcagcctggaaatgccattcaagcagatccccgcc
gacatgcagaagattctgctcaacggcagtggctcgcagagtgtcgatttccgctacctc
aatgaaagtggcgatatcgtcaagcgtgcgcacccgttcgaaggcatcgtgccgaatctg
gagcgtcgctatcgggaaaccgaatcggctacggtccgcgaagagctggccaagttcctg
ggcacacagccctgccctgactgccgaggcactcgcctgcgtcgcgaagcgcgccatgtg
tgggtgggtgaaaagactctgcctgcagtcaccagtctgccgattggcgacgcgacgcat
tactttgaaacgctcaagctgaccggacgacgtggcgagatcgccgacaagattctcaag
gaaatccgtgagcgtctgcagtttctggtcaacgtgggcctggactacctgaccctggat
cgtagcgcagacaccctgtccggcggcgaagcacagcgtatccgtctggccagccagatc
ggtgcggggctggtcggggtgatgtacatcctcgatgagccgtccatcggtctgcaccag
cgcgacaatgatcgtttgctgggcacgctcaagcacctgcgcgacatcggcaatacggtg
attgtggtcgagcacgatgaagatgcgattcgcctggccgactacgtggtcgacatcggc
ccgggggccggcgtgcatggtggtcatattgtcgccgaaggtacgccggacgaggtgatg
tcgcatcccgactcgctgaccggcaaatacctgtcagggcgcgtgaagattgctgttcct
gccaagcgcaccccgcgtaacaagaagctctcgctgaccctcaagggcgcgcgtggcaac
aacctgcaaaacgtcaatctcgacatcccgatcggcctgctgacctgcgtgacgggtgtt
tccggatcgggcaagtcgacgctgatcaacaacacgctgttcccgctgagcgctacggcg
ctgaacggcgccacgacgctggaagcggctacgcacgacagcatcaacggcctccagcac
ctggacaaggtggtggacatcgaccagagccctatcggtcgtacgccgcgctccaacccg
gcgacctacaccgggctgttcacgccgattcgcgagctgttcgccggagttccggaatca
cgctcgcggggctatggtccggggcggttctcgttcaacgtcaagggcggccgctgcgag
gcgtgccagggcgacgggctgatcaaggtcgagatgcactttttgccagacatctacgtg
ccctgcgacgtgtgcaagagcaagcgttacaaccgcgaaacgcttgaggtcaagtacaag
ggcaagaacgtccacgaagtgctggaaatgaccatcgaggaagcgcgtgagttcttcgac
gccgttccggcactggcgcgcaagctgcaaaccctgatggatgtaggactttcctatatc
aagctggggcaatcggcgacgaccctgtcaggcggtgaagcgcagcgggtcaagctgtcg
cgtgagctgtccaagcgcgacaccggcaagacgttgtacatcctcgacgagccgaccaca
ggcctgcacttcgcggatattcagcagctgctggatgtattgcatcgcctgcgcgaccac
ggcaataccgtggtggtgatcgagcacaacctggatgtgatcaagacggccgactggctg
gtggatctgggtccggaaggcggctcgcgaggtgggcagatcattgcgacgggcacacct
gaacaggtcgccgagatggaacagtcctacaccggtcattacctgaaacctctgttgacc
agagataaagcctga
DBGET
integrated database retrieval system
