Pseudomonas sp. KUIN-1: KUIN1_50300
Help
Entry
KUIN1_50300 CDS
T09878
Name
(GenBank) type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
psku
Pseudomonas sp. KUIN-1
Pathway
psku02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KUIN1_50300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psku02044
]
KUIN1_50300
Secretion system [BR:
psku02044
]
Type VI secretion system
Imp/Vas secretion system core components
KUIN1_50300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
BBN65840
LinkDB
All DBs
Position
complement(5821207..5822685)
Genome browser
AA seq
492 aa
AA seq
DB search
MPSNSSAKQKSVETSEHSILDSIIAQTSLTRDDEAYDIAKRGVSAFIEELLKPQNDGEPV
KKAMVDRMIAEIDAKLSRQMDEILHHPDFQSLESSWRGLQLLVDRTNFRENIKIEILNVS
KDDLLEDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSS
VACMSHAPFIAAAGPKFFGLESFSGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVGLTV
PRFLLRNPYDPQENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIG
PQSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFS
ASSVQKPKFFGNSAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLE
LELNKWIRQYVADQENPSAEVRGRRPLRAAQITVSDVEGEPGWYRVSLNVRPHFKYMGAD
FTLSLVGKLDKE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcaatagctcagcaaagcaaaaaagcgttgagacaagcgaacacagtattctc
gacagcatcattgcccagaccagtctgacgcgtgacgacgaagcctatgacatcgccaag
cgtggcgtatcggcctttattgaagagctgctaaagccgcagaacgacggtgagccggtc
aagaaggcaatggtcgaccgcatgatcgccgagatcgatgccaagctcagccgccagatg
gacgaaatcctccaccaccctgacttccagtccctggaatcgtcgtggcgtggcctgcag
ttgttggtcgatcgcaccaacttccgtgaaaacatcaagatcgaaatcctcaacgtctcc
aaagatgatttgctggaagacttcgaagactcgccggaagtgatgcagtcgggcctgtac
aagcacatctacaccgcagaatacggccagttcggtggccagccagtgggcgcgatcatc
gccaactatttcatgtcgccaagctcgccggacgtgaaactcatgcagtacgtatccagc
gtagcctgcatgtctcatgcaccgttcattgctgctgccggcccgaaattcttcggtctg
gagagcttctccggcttgcctgacctgaaggatctgaaagatcacttcgaaggtccgcag
ttcgcaaaatggcagagcttccgccagtcggaagattcccgttatgtcggcctgaccgtt
ccgcgcttcttgctgcgcaacccgtacgacccgcaagaaaaccccgtcaagtcgttcgtg
tacaaggaaaccgtcgccaacagccacgagcattatctgtggggcaacacggcttacgcg
ttcggcaccaagctgaccgacagtttcgccaagttccgctggtgcccgaacatcatcggc
ccgcagagcggcggtgcagttgaagacctgccgttgcaccatttcgaaagcatgggcgaa
atcgagaccaagatccctaccgaggttctggtcagcgaccgtcgtgaatacgaactggct
gaggaaggcttcatctccctgaccatgcgtaagggcagcgacaacgcggcgttcttctcc
gccagttccgtgcagaagccgaagttcttcggtaacagcgcagaaggcaaggctgcagag
ctgaactacaagctgggcacccagctgccgtacatgatgatcgtcaaccgcctggctcac
tacttgaaagtgctgcagcgcgagcaactcggttcgtggaaagagcgtaccgatctcgag
ctggaactgaacaagtggatccgtcagtacgtcgccgaccaggaaaacccgagcgccgaa
gtgcgtggtcgtcgcccgttgcgcgccgcccagatcaccgtcagcgacgtcgaaggcgag
cccggctggtaccgcgtcagcctgaacgtgcgcccgcacttcaaatacatgggtgctgat
ttcaccctgtcgctggttggcaagctggacaaagagtaa
DBGET
integrated database retrieval system