KEGG   Pseudomonas sp. KUIN-1: KUIN1_50300
Entry
KUIN1_50300       CDS       T09878                                 
Name
(GenBank) type VI secretion protein
  KO
K11900  type VI secretion system protein ImpC
Organism
psku  Pseudomonas sp. KUIN-1
Pathway
psku02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:psku00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    KUIN1_50300
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psku02044]
    KUIN1_50300
Secretion system [BR:psku02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KUIN1_50300
SSDB
Motif
Pfam: VipB VipB_2 VMAP-M0
Other DBs
NCBI-ProteinID: BBN65840
LinkDB
Position
complement(5821207..5822685)
AA seq 492 aa
MPSNSSAKQKSVETSEHSILDSIIAQTSLTRDDEAYDIAKRGVSAFIEELLKPQNDGEPV
KKAMVDRMIAEIDAKLSRQMDEILHHPDFQSLESSWRGLQLLVDRTNFRENIKIEILNVS
KDDLLEDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSS
VACMSHAPFIAAAGPKFFGLESFSGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVGLTV
PRFLLRNPYDPQENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIG
PQSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFS
ASSVQKPKFFGNSAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLE
LELNKWIRQYVADQENPSAEVRGRRPLRAAQITVSDVEGEPGWYRVSLNVRPHFKYMGAD
FTLSLVGKLDKE
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgccaagcaatagctcagcaaagcaaaaaagcgttgagacaagcgaacacagtattctc
gacagcatcattgcccagaccagtctgacgcgtgacgacgaagcctatgacatcgccaag
cgtggcgtatcggcctttattgaagagctgctaaagccgcagaacgacggtgagccggtc
aagaaggcaatggtcgaccgcatgatcgccgagatcgatgccaagctcagccgccagatg
gacgaaatcctccaccaccctgacttccagtccctggaatcgtcgtggcgtggcctgcag
ttgttggtcgatcgcaccaacttccgtgaaaacatcaagatcgaaatcctcaacgtctcc
aaagatgatttgctggaagacttcgaagactcgccggaagtgatgcagtcgggcctgtac
aagcacatctacaccgcagaatacggccagttcggtggccagccagtgggcgcgatcatc
gccaactatttcatgtcgccaagctcgccggacgtgaaactcatgcagtacgtatccagc
gtagcctgcatgtctcatgcaccgttcattgctgctgccggcccgaaattcttcggtctg
gagagcttctccggcttgcctgacctgaaggatctgaaagatcacttcgaaggtccgcag
ttcgcaaaatggcagagcttccgccagtcggaagattcccgttatgtcggcctgaccgtt
ccgcgcttcttgctgcgcaacccgtacgacccgcaagaaaaccccgtcaagtcgttcgtg
tacaaggaaaccgtcgccaacagccacgagcattatctgtggggcaacacggcttacgcg
ttcggcaccaagctgaccgacagtttcgccaagttccgctggtgcccgaacatcatcggc
ccgcagagcggcggtgcagttgaagacctgccgttgcaccatttcgaaagcatgggcgaa
atcgagaccaagatccctaccgaggttctggtcagcgaccgtcgtgaatacgaactggct
gaggaaggcttcatctccctgaccatgcgtaagggcagcgacaacgcggcgttcttctcc
gccagttccgtgcagaagccgaagttcttcggtaacagcgcagaaggcaaggctgcagag
ctgaactacaagctgggcacccagctgccgtacatgatgatcgtcaaccgcctggctcac
tacttgaaagtgctgcagcgcgagcaactcggttcgtggaaagagcgtaccgatctcgag
ctggaactgaacaagtggatccgtcagtacgtcgccgaccaggaaaacccgagcgccgaa
gtgcgtggtcgtcgcccgttgcgcgccgcccagatcaccgtcagcgacgtcgaaggcgag
cccggctggtaccgcgtcagcctgaacgtgcgcccgcacttcaaatacatgggtgctgat
ttcaccctgtcgctggttggcaagctggacaaagagtaa

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