Pseudomonas sp. KUIN-1: KUIN1_51320
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Entry
KUIN1_51320 CDS
T09878
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psku
Pseudomonas sp. KUIN-1
Pathway
psku03420
Nucleotide excision repair
psku03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KUIN1_51320
03430 Mismatch repair
KUIN1_51320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psku03400
]
KUIN1_51320
Enzymes [BR:
psku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KUIN1_51320
DNA repair and recombination proteins [BR:
psku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KUIN1_51320
MMR (mismatch excision repair)
Other MMR factors
KUIN1_51320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBN65942
LinkDB
All DBs
Position
5935434..5937617
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AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLVQTFQILDSDD
QQRLVKRVMRELGLDEQRWPARQAQWFINGQKDEGLRPKHIQASGDLFLTTMKSVYEAYE
IACQRAGVIDFSELLLRALDLWRDNPGLLAHYQRRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDTEVIRLEQNYRSTASILKAANGLII
NNSGRLGKELWTDVGDGELINLYAAFNEHDEARYVVETIESALKTGISRNDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHADVSMWEAMRLLVANKGLTGRAATALGGFIELIENLAAKVMEMPLH
LMTQTVIEQSGLITYHEQEKGEKGQARVENLEELVSAARAFENHESEEDLTPLAAFLGHA
SLEAGDTQAQEHEDSIQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMKQLVMTYAETRRLYGSETYNKVSRFVREIPPALIQEVRLSNSVNRPFGGTP
KFNSSSLFNGTGIPETEFTMGQRVQHAVFGEGVILNFEGAGAQARVQVNFSEGSKWLMMG
YAKLVPL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttcttctgaattccctcaacgatgcccaacgtcaggccgta
gctgcctctctgggtcgtcagttggttctggctggtgctggctccggcaaaacccgtgtg
ctggtgcatcgcatcgcctggctgatgcaggtcgagcaagcctccccgcattcggtcctg
tcggtgacgttcaccaacaaggccgccgccgagatgcgccaccgtatcgagcagctgatg
ggcatcagcccggctggcatgtgggtgggcaccttccacggtctggcccaccgcctgttg
cgtgcgcactggcaggaagccgggctggtacagaccttccagattctcgacagcgacgac
cagcagcgtctggtaaagcgcgtgatgcgcgagctgggcctggacgaacaacgctggcct
gcacgtcaggcccagtggttcatcaatggtcagaaagacgaaggcctgcgcccgaaacat
attcaggccagcggcgacctgttcctgaccaccatgaaaagcgtctacgaagcctacgag
atcgcctgccagcgagccggcgtcatcgacttctccgaactgctgctacgcgcactcgac
ctgtggcgcgataacccgggcttgctggcgcattatcagcgccgcttccgtcacgtcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctcgcccag
gggggcgacagcctgatggtggtcggcgacgacgatcagtccatttacggctggcgtggc
gcgaagatcgagaacatccaccagtattcctccgacttcccggacaccgaagtcatccgc
ctggagcagaactaccgctccacggcgagcatcctcaaggccgccaatggcttgatcatc
aataacagtggtcgcctgggcaaggaattgtggaccgacgtcggcgatggcgagctgatc
aatctgtacgccgcgttcaacgagcacgatgaagcgcgttacgtggtcgagaccatcgag
agcgcgctgaaaaccggtatttcgcgcaacgatatcgccattctgtaccgctccaacgcc
cagtcgcgggtgcttgaagaagccctgctgcgtgagcgtattccgtaccgcatctacggc
ggacagcgcttcttcgagcgtgccgaaatcaagaacgccatggcctacatgcgcttgctg
gaaggccgtggcaacgatgcggcactggagcgggtgatcaatgttccggcgcgcggcatc
ggtgaaaagaccgtcgaagcgattcgcgagcatgcgcgtcatgccgacgtctccatgtgg
gaagccatgcgcctgctggtggccaacaagggcctgaccggacgcgccgccactgccctg
ggcggtttcatcgagctgatcgagaacctcgcggccaaggtcatggaaatgccgctgcac
ctgatgacccagacggtgatcgaacagtccgggctgattacctatcacgagcaggaaaaa
ggcgagaaaggtcaggcgcgggtagaaaaccttgaggaactggtcagcgctgcgcgtgcc
ttcgagaatcacgaaagcgaagaagacctgacgccactggcagcgttcctggggcatgcc
tcgctggaagcgggcgacacccaggcgcaggagcatgaagacagcattcagctgatgacc
ctgcacagcgccaagggcctggaattcccgcatgtgttcctggtaggcatggaggaaggg
ctgttcccgcacaagatgagcctggaagaaccgggccgtcttgaagaggaacggcgtctg
gcctatgtcggcatcacccgggccatgaaacagctggtgatgacctacgccgagacgcgt
cgtctgtacggcagcgaaacctacaacaaggtctcgcgtttcgtacgggagatcccgcct
gcgctgattcaggaagtccggctgtccaacagcgtcaaccgtccgttcggcggcacgccg
aaattcaacagcagcagcctgttcaacggcaccggcattccggaaaccgagttcaccatg
ggccagcgcgtccagcatgcggtgttcggcgaaggcgtgatcctcaacttcgaaggcgct
ggcgcccaggcgcgggtgcaggtcaacttctccgagggcagcaagtggctgatgatgggc
tacgcgaagctggtgccgttgtag
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