Phocoenobacter skyensis: A6B44_02325
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Entry
A6B44_02325 CDS
T06668
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psky
Phocoenobacter skyensis
Pathway
psky03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A6B44_02325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psky03400
]
A6B44_02325
Enzymes [BR:
psky01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A6B44_02325
DNA repair and recombination proteins [BR:
psky03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A6B44_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
UvrD-helicase
SLFN-g3_helicase
SH3_13
IgD2_Trs65
AAA_22
UvrD_C
nSTAND3
DEAD
PH_Tiam1
Rad17
TrwB_AAD_bind
ResIII
T2SSE
AAA_7
NTPase_1
AAA_29
ATPase
Motif
Other DBs
NCBI-ProteinID:
QLB22097
LinkDB
All DBs
Position
complement(502785..504743)
Genome browser
AA seq
652 aa
AA seq
DB search
MLALLERLKQQNIISELNYQFAKMIDQKQQRYSYTSQQQNLAILLAGLISYNVMQSNTAL
RLDSAIANNPFNLKGKNLPEDFYSQILAKIDNATPLQWQSILHNHTAFSDNPNRIAPMLF
QHQLLYFYRYWQSENRIANYLQQAVTSEPKFAKNKPNDTALEKLFPLIQETKTTDIDWQK
IAVATALNKKFTLISGGPGTGKTTTIIKILLALQWQQLEANLAPLNIILAAPTGKATARL
KESISHNLRYFDFPKEVKLQIPTNAFTLHRLLGISPKSDTPKYHRDNPLHLDVLVVDEAS
MIDLSLMEKMINALPPTTRLIMLGDKDQLASVEAGNIMSELGEFITLGYSEQHCQYLNKV
TGYQLATNNAQTPPICDSLCHLRHSYRFNENSGIFHLSVQINAQQAVTSWQLFAKFADLH
LVEYQAATQFSEKIKWEEHCIQQIINRAVVLYTDYLALVKQRNKNPDSVSVEHIFTAFNK
VRFLSALRVGNFGVEKLNERIAEALRLKNLIHFSHQRENYSGKAIMITENTPSSHIYSGD
IGLILPDEQGHLRVYFETTMNGKPHSITPSRLPNYEMAYIMTVHKSQGSEFEHTLLILPL
TYSPILTKELLYTAITRAKNQFTLFGNEKIWRQMVNAKIQRQSGLMEQLTLN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgttggccttactggaacgtttaaaacaacaaaatattatcagtgaattgaattatcaa
tttgccaaaatgatagatcaaaaacaacagcgctattcttatacgtctcaacaacaaaat
ttagctatcttactggctggcttaatttcctacaatgtgatgcaaagtaatactgcatta
agattagattctgctatcgctaataatccttttaatttgaaagggaaaaatctgcctgaa
gatttttattcacaaattttagcaaaaattgacaacgcaacacccttacaatggcaatca
atattacacaatcataccgcttttagtgataatcctaatcgcattgctccaatgttattt
caacatcaactgctctatttttatcgctattggcaatctgaaaatcgtattgctaattat
ctccaacaagcggtcacatcagaaccaaaatttgcaaaaaataaacctaatgataccgct
ttagaaaagctgtttcctcttattcaagaaactaaaacaacagatattgattggcaaaaa
atagcggtagcaaccgcattaaataaaaaattcaccctcatttcaggagggccaggaaca
ggtaaaaccaccactattattaaaattttacttgctctacaatggcaacagttagaagca
aatctagcaccattaaatattattttagctgcaccaacggggaaagccactgctcgttta
aaagaatctattagtcataatctacgttatttcgatttccctaaagaagtcaaattacag
attccaaccaatgcgtttaccctacaccgtttattgggtatttcgccaaaaagtgatact
cctaaatatcatcgtgataatccgttacatttagatgtcttagtcgtagatgaagcctca
atgattgatttatcattaatggaaaaaatgatcaatgcgcttcctccaaccactcgacta
ataatgctaggtgataaagaccaactcgcttctgtggaagcaggtaatataatgagcgaa
ttaggggagttcattactttgggttattcagagcaacattgtcaatatttgaataaagtc
acaggataccagcttgctaccaacaatgcacaaacaccacctatttgtgattcactctgc
catttaagacacagctatcgttttaatgaaaactcaggtatttttcatttaagtgtccaa
attaatgctcaacaagcggtcacatcatggcaactttttgcaaaatttgccgaccttcat
ttggttgaatatcaagcagcaacacaatttagtgaaaaaataaaatgggaagaacattgt
attcaacaaattattaatcgtgccgttgtgctgtacactgactatttagcccttgttaaa
caacgtaataaaaaccctgactctgttagtgtggaacacatttttactgcctttaataaa
gtgcgttttttatctgctctacgagtaggtaattttggtgttgaaaaactgaatgagcgt
attgcggaagcactacgtttaaaaaatctcattcatttttcccatcaacgtgaaaattac
agtggtaaagcgattatgattaccgaaaatacgccatcatctcatatttacagtggtgat
attgggcttattttacccgatgaacaagggcatttacgtgtttattttgaaaccacaatg
aatggcaaaccacatagcatcacccctagccgactaccaaattacgaaatggcttacata
atgacagtacataaatcacaaggctctgaatttgaacataccctactcattttaccctta
acttactcgcctattttgacaaaggaactcctctacactgccattacacgagccaaaaat
caatttacgctttttggaaacgaaaaaatatggcgacaaatggtaaatgcaaaaatacag
cgtcaaagtggtttaatggagcaattaactcttaattaa
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