Phocoenobacter skyensis: A6B44_02485
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Entry
A6B44_02485 CDS
T06668
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
psky
Phocoenobacter skyensis
Brite
KEGG Orthology (KO) [BR:
psky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psky03400
]
A6B44_02485
DNA repair and recombination proteins [BR:
psky03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
A6B44_02485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
FtsK_SpoIIIE
AAA_16
AAA_22
ResIII
TrwB_AAD_bind
CbiA
AAA
AAA_30
nSTAND3
P-loop_TraG
SRP54
T2SSE
AAA_7
Hydrolase
DUF2076
AAA_19
AAA_6
Zeta_toxin
DUF612
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QLB22122
LinkDB
All DBs
Position
542254..543741
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AA seq
495 aa
AA seq
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MTNYTIAQTKSGNSISLTSKMANRHGLIAGATGTGKTVTLRKLAESFSDDGIPVFLVDVK
GDISGLTQKGELSGKVAERIENFNLGGEDYLSAFPVSFWDVFGKTGIPLRTTISEMGPIL
LSRLLNLNDTQEGLLNLVFRVADDQGLLLIDLKDLRAMLQYVGENAKKFRMEYGNVSAAS
IGAIQRSLLSLENEGATQLFGEPSLNLDDWLQTRDGRGVINILNSEQLINSPKLYSAFLL
WLMSELFENLPEIGDPEKPKFVMFFDEAHLIFDDAPKALVDKVEQVVRLIRSKGVGVYFV
TQNPLDLPDSVLGQLGNRVQHALRAFTPRDQKAVKAAAETFRSNPDVDVVESISQLGIGE
ALVSVLDEKGMPTPVEIAYIYPPKSQLDPISHSEREQFVQKDDLYGYYSKYIDEQSAYEE
LHKQIEIEQQQIQQEQEESNSLLGGIIASIFGKKKRREQSATEQMVSGITKAVGRNIRNQ
IARQIVRGVLGAMKK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattacacaatcgcacaaacaaaatctggaaattctattagccttacatcaaaa
atggcaaaccgtcacggactaattgcaggtgcaacaggaacggggaaaaccgttacacta
cgcaaacttgcggaaagtttcagtgatgatggcatccctgttttccttgttgatgtcaaa
ggagatatttcaggtttaacccaaaaaggggaactctctggtaaagttgctgaacgtatt
gaaaactttaatttaggtggtgaagattatctttctgcattcccagtctctttttgggat
gtattcggcaagacaggaatcccacttagaacaaccatttcagaaatggggccgatttta
ttaagtcgcttactcaatttaaacgatactcaagaaggattactcaacttagtctttcgt
gttgctgatgatcaaggattactccttatcgatcttaaagaccttcgtgcaatgctgcaa
tatgtcggagaaaatgcgaaaaaattcagaatggaatatggtaatgtatcggcagcaagt
atcggtgcaatccaacgttcattactttctcttgaaaatgaaggagcgacgcagttattt
ggggagccgtcattaaatttagatgattggctacaaactcgtgatgggcgtggtgtaatt
aatattttaaattctgaacaattaattaactctccaaaactctacagtgcctttttatta
tggttaatgtcagaactttttgaaaacctacctgaaattggtgatcctgaaaaaccgaaa
tttgtgatgttttttgacgaagctcacctgatttttgatgatgcaccaaaagcattggta
gataaagtggaacaagtcgtacgcttaattcgttctaaaggtgtgggcgtttattttgtg
actcaaaatcctcttgatttaccagatagcgtattaggacaacttggaaaccgtgttcag
cacgccctaagagcctttacacctcgtgatcaaaaagcagtaaaagcagcagcagaaact
ttccgttccaaccctgacgtcgatgtcgtagaaagtatttcacaacttggtattggtgaa
gcgttagtttcagtactagatgaaaaaggaatgccaacaccagttgaaattgcttatatt
tatccaccaaaaagccaacttgatcctatttcacacagtgaacgagagcaatttgtacaa
aaagacgacttatatggctattatagtaaatacattgatgagcaatcggcttacgaagag
ttacataaacaaatcgaaattgaacaacaacagattcaacaagagcaagaagaaagtaac
agtttactgggtggcattattgcctcaatttttggtaagaaaaaacgcagagaacagagt
gcaacagaacaaatggtgagtggtattaccaaagccgtaggtcgaaacattcgtaatcaa
attgcacgacaaattgtacgtggtgtattaggagcgatgaaaaaataa
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