Phocoenobacter skyensis: A6B44_03780
Help
Entry
A6B44_03780 CDS
T06668
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psky
Phocoenobacter skyensis
Brite
KEGG Orthology (KO) [BR:
psky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psky03032
]
A6B44_03780
03400 DNA repair and recombination proteins [BR:
psky03400
]
A6B44_03780
Enzymes [BR:
psky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A6B44_03780
DNA replication proteins [BR:
psky03032
]
Prokaryotic type
DNA Topoisomerases
A6B44_03780
DNA repair and recombination proteins [BR:
psky03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A6B44_03780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
CEP104_ZnF
Motif
Other DBs
NCBI-ProteinID:
QLB22366
LinkDB
All DBs
Position
811100..813751
Genome browser
AA seq
883 aa
AA seq
DB search
MAKSLVIVESPAKAKTINKYLGKDYVVKSSVGHIRDLPTAGSSSGEKAKAISTKGMTAEQ
KAKIKAEKDRKALVKRMGIDPYHDWEPNYQVLPGKEKVVSDLQAQAKKADHIYLATDLDR
EGEAIAWHLREVIGGDDSRFSRVVFNEITRNAIQKAFETPEHLNMDRVYAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFLPEEFWEVATQNTAKSGAIT
LDLTHFKGKKWSAKNQQEADQTVKSLQCSDFVVSRIDKKPTSSKAKPPFITSTLQQSAST
RLGFGVKKTMMLAQRLYEAGYITYMRTDSTSLSQDALAMARGYIESKFGTDYLPEKPNFY
SSKGNAQEAHEAIRPSNVATKSSDLVVMDKDAVRLYELIWRQFLACQMTAAKYDSTSLTI
TAGDYELKAKGRVLRFDGWTKVQPLLGKSAEDQVLPELTLNEVLTLNKVISTQHFTKPPA
RFSEAALVKELEKKGIGRPSTYAAIISTIQDRGYVRVENRRFYAEKMGEIVIDRLDESFS
DLMNYDFTANMEDNLDQIASGNSNWKQELDRFFKDFSEKLSKAELDELEGGMRPNNVVEI
DVDCPDCKRNMAIRTASTGVFLGCTGYALPPKERCKKTMNLIPEAELLNVLDEDSETNAL
LNRKRCPKCDTAMDSYLVDPERKLHICGNNPNCDGYLIEQGSFKIKGYDGPIVECDKCEA
EMHLKLGRFGKYMACTKCDNTRKILKNGEVAPPREEPTYFPELKCEKSDAYFVLRDGASG
VFMSAHNFPKSRESRSPKVAELAQFKDRLPEKLRYLAEAPQKDPEGNEAIIRFSRKEKRQ
YVTSEKEGKATKWLVDYIDGKWVERVTKTKAKAKTKTTTKKKK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcattagtaattgtggagtctccagcaaaagccaaaacaatcaataaatat
ttaggtaaagactatgtggtgaaatcaagtgtggggcatattcgagatttacctacggct
ggcagtagctctggtgaaaaagcaaaagcgatttcaactaaaggtatgaccgccgagcag
aaagcaaaaattaaagcagagaaagaccgtaaagcattagtcaaacgaatgggaattgac
ccttatcacgattgggagcctaattatcaggttttacctggtaaagaaaaagtcgtttca
gatttacaagcccaagccaaaaaagcggatcatatctatctcgcaaccgatttggataga
gaaggggaagccattgcgtggcatttacgtgaagtgatcggaggagatgatagtcgcttt
agtcgagtagtatttaatgaaatcactcgtaatgccatccagaaagcctttgagacccct
gaacacttaaatatggatcgtgtgtatgctcaacaaacaagacgtttcttggaccgtgtt
gtgggctttatggtgtctccattactatggaaaaaagtcgctagaggattatcggctgga
cgtgtgcaatctgttgccgtgaaactgttagttgagcgtgaacgtgaaatcaaagctttt
ttacctgaagagttttgggaggtcgctactcaaaataccgctaaaagtggggcaatcact
ttagatttaacgcattttaaagggaaaaaatggtcagcgaaaaatcagcaagaggcagac
caaaccgttaaatcgttacaatgtagcgattttgtggtgagtagaatagacaaaaaacca
acttcatcaaaagcaaaaccgccttttattacatcaaccttacaacaaagcgctagcaca
cgtttaggctttggggtaaagaaaacaatgatgttagctcagcgtttatatgaagcaggg
tatatcacctatatgcgtacggactccacaagtttaagtcaagatgcgttagcaatggct
cgtggttatattgaaagtaaatttggtacagattatttacctgaaaaaccaaacttttat
tccagtaaaggaaatgcacaagaggctcacgaagcaattcgtccttcaaatgtggcgacc
aaatccagtgacttagtggtaatggataaagatgcagtgcgtttatatgagttaatttgg
cgacaatttttagcttgtcaaatgacagcagcaaaatatgactccactagcttaaccatt
accgcaggggactacgaattaaaagccaaagggcgtgtattacgttttgatggttggact
aaagtgcaacctttattaggtaaatcagcagaagatcaagttttacctgaattaacttta
aatgaagtattaactttaaataaagtaatatcaacgcaacatttcactaaaccacctgca
cgttttagtgaggcagcgttagttaaagaattagagaaaaaaggcattggtcgtccttca
acctatgccgccattatttcaaccattcaagatcgagggtatgttcgagtagaaaaccgc
cgtttttatgcagagaaaatgggtgaaatcgtgattgatcgtcttgatgaatcttttagc
gatttaatgaattacgattttacggcaaatatggaggataatcttgatcaaattgcttct
ggaaacagtaattggaagcaagagttagatcgtttctttaaagatttttcagaaaaactc
tccaaagcagaattagacgagttagaaggcggaatgcgtcctaataacgtggttgagatt
gatgtagattgtcctgattgtaaacgtaatatggcaattcgtactgcaagtacaggggtt
ttcttaggttgtacaggttatgccttacctccaaaagagcgttgtaaaaaaacaatgaat
ttaattcctgaagcggaattattaaatgtgttggatgaagattccgaaaccaacgcccta
ttaaatcgtaaacgttgtccaaaatgtgatacggcaatggatagctacttagtcgatcct
gaacgtaaattacatatttgtggaaataaccctaactgtgatggttatctgattgaacag
ggtagctttaaaattaaaggttacgatggccctattgtcgagtgtgataaatgtgaagct
gaaatgcacctgaaattagggcgttttggtaagtatatggcgtgtactaagtgtgataat
acccgtaaaattcttaaaaatggtgaagttgcccctcctcgtgaagagccaacctatttt
cctgaattaaaatgtgaaaaatcggatgcttattttgtactgcgtgatggagcgagtggc
gtgtttatgtcggcacataatttccctaaatctcgtgaaagtcgttcaccaaaggtcgca
gaattagcacagtttaaagatcgattacctgaaaaattacgttatttagcagaagcacct
cagaaagatcctgagggtaacgaagccattatccgctttagtcgtaaagagaaacgtcaa
tatgtcacctctgaaaaagagggtaaagccactaaatggctggtggattatattgacggt
aagtgggtggaaagagtaaccaaaacaaaagccaaagcgaaaacaaaaaccaccacgaag
aaaaagaaataa
DBGET
integrated database retrieval system
