Phocoenobacter skyensis: A6B44_04530
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Entry
A6B44_04530 CDS
T06668
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psky
Phocoenobacter skyensis
Brite
KEGG Orthology (KO) [BR:
psky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psky03016
]
A6B44_04530
Enzymes [BR:
psky01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A6B44_04530
Transfer RNA biogenesis [BR:
psky03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A6B44_04530
Prokaryotic type
A6B44_04530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QLB22506
LinkDB
All DBs
Position
complement(955281..956219)
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AA seq
312 aa
AA seq
DB search
MGRRPRKKGRDINGVFLLDKPQGMSSNHILQKVKSVFNANKAGHTGALDPLATGMLPICF
GEATKFSQFLLDSDKRYIVTAKLGERTDSSDADGEIVQTRAIEVIQSQIIDALEQFRGNI
LQVPTMFSALKHNGKPLYEYARAGITIEREARPITIFELNFISYEEPYLTLEVHCSKGTY
IRTLIDDLGEKLGCGAHVTVLRRIGVATYPASKMMTWDKLQNLAESHSLSELDQYLLPVD
SAVATLPKLSLNSEQTKAVGFGQRLKLMNDQQIFGQVRLFSATDCFLGIGDVDKNNILRP
NRMINSVHSDIV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgggtagaagacctcgtaaaaagggcagagatattaacggtgtatttttactagataaa
cctcaaggtatgagctctaatcatattttacaaaaggtaaaaagtgtatttaatgcgaat
aaagcaggacatacaggcgccttagatccattagcaacaggtatgttgccgatttgtttt
ggtgaagcgactaaattttctcagtttcttttggattcggataagcgatatattgttact
gcaaaactgggagagcgaacagatagctccgatgcagatggagagatcgttcaaactcgt
gctattgaggttatacaatcacagattatcgatgctttagagcaatttcgaggtaatatt
ttacaagtacccacaatgttttccgcattaaaacataacggaaaaccgctttatgaatat
gcaagggcaggtattaccattgagcgagaggctcgtccaattactattttcgaacttaac
tttataagttatgaagagccttatttaaccttagaagtacattgttcaaaaggcacttat
attcgtactttaattgatgatttaggtgaaaaattaggttgtggagcccatgtgactgta
ttgcgaagaattggtgtcgcaacttatccagcgtcaaaaatgatgacttgggacaaatta
caaaacctagctgaaagtcattcgttaagtgagttagatcaatatttgttacctgtagac
agtgccgtagccactttacctaaactatcactgaatagtgaacaaacaaaagcagtcggt
tttgggcaacgtttaaaattgatgaacgatcaacaaattttcggacaggttcgtttgttc
tctgccacagattgttttcttggtatcggagacgttgataaaaataatattcttagacca
aatagaatgattaatagcgttcatagtgacattgtttaa
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