Phocoenobacter skyensis: A6B44_05620
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Entry
A6B44_05620 CDS
T06668
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
psky
Phocoenobacter skyensis
Brite
KEGG Orthology (KO) [BR:
psky00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psky02000
]
A6B44_05620
Transporters [BR:
psky02000
]
Other transporters
Pores ion channels [TC:
1
]
A6B44_05620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
ESPR
YadA_stalk
Collagen
Motif
Other DBs
NCBI-ProteinID:
QLB22716
LinkDB
All DBs
Position
complement(1154720..1158661)
Genome browser
AA seq
1313 aa
AA seq
DB search
MNSIYKIVFNKATQTFTAVSELAKGATKTQSQSIKQAGTFLPKFAKITLAISMVLGFSAS
AIAVTDEEFNALKQQVEALKAQKTYVHVNNGTNTGTGDATINLGDISTAAGAVTGSSIAI
GRGAIAGKLNADFILDNDATNQDETITTNKEASVAIGEGAKSTGFASIAIGGSYNRPKYE
NGVLKTAGIGAAEATGDGAVALGNSTKAEAKGAFAVGLLARAAGEFSSAIGYSASATAEG
ARALGIYTEASGVYSTSMGYKTTSSGSSSLATGAYTTASWKYSVAMGLKSKAVGNGSLAL
GGYTNDSSDILEGGQAYTAGSMALGTGTVAGIENGTEEAVAMGYRAKAVADNTLALGFDA
KAEHENSVALGSNAETKAFTQVDETEAINGLKYKDFTGFADGVVSVGKDYHEKQIINVAP
GKIAQTSTDAINGSQLFATNKAIGNVAKSVKNNFGGNAALNEDGNITFTNIGGTGKGTIH
EAIGDIKTTADAAKRKTLANSTTLNNKADKNAGNLGAAEVNAWTTKLNTGANITAPTGKL
VTDSQVKTALDTKLDADDITSKDKTVTIDTTTTAGKVDLKVNLDGTTLTKDGNGVISLAD
NAVTTAKILDGKVTKVKLAGDVTNILDKVGAGAVADGNTNTVTGDVVKTYVDTATAGKLD
KGDLNVIESDDITVSNAGDLTKGNVKLSLKADKVKELAGTTDLATTYLNVSGANVGDKVT
FGGNVGTATLANTTELAQIKAVKAVDDKVTGNTQTITNLGDQITNVGKTSKEEVAIVENS
GLTLAKTAATANKGAVYTLGLDAAKVKEVAGTTTLAADLAAKANKDASNLTDGDKADWKR
ALDLGNVLTSANLADRLLITGSNVGSDDNKVKLGKNVGKGEITGETTQLVQEKAVKTYVD
TAIDKVGKAKDGKDGHIGVDGKDGKDGSIGLSGKDGITVKGKDGENGVSIHGDDGISIKG
EDGKTLVTLGKDGQNGVIGLQGAPGKNGADGKFYDISIQNGKGGLDGTTTDRIVYVDKAT
GDKKEVATLDDGLAFQGNDASKKVTTALNGTLVIEGQKGTDPAKNLTKDSDFAADNIFVD
TTDGKLEIKLAKKLQGVEGIGIAGKDGLSIAGKDGANGLNGKDGENAVAINGKDGISIKG
KDGKDGVSIKGEDGISIKGKDGMDGLNGIGLNGKDGITVNGKDGKDGKDSIAINGKDGIS
IKGENGKDGISIKGEDGIAVNGKNGKDGVSIHGDDGISIKGEDGKTLVTPGKDGQNGVIG
LQGAPGKNGADGKFYDISIQNGKDGLDGTTTDRIVYVDKATGEKRKLPHWMMA
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcatctacaaaatcgtgtttaacaaagcaacacaaacttttaccgccgtaagc
gaattagctaaaggcgccacgaaaacacaaagtcaatcaataaaacaagcgggtacattt
ttaccaaaatttgcaaaaattactttggcaatctcaatggtgctgggttttagtgcttca
gcaatagcggttactgatgaagaatttaatgcactaaaacaacaggttgaagcattaaaa
gcacagaaaacctatgttcatgttaataatggaacaaatacagggacaggagatgcaact
ataaatttaggagatatttctacagcagcaggagccgttacaggtagttcgatagctata
ggtagaggtgcaatagcaggaaaattaaatgcagattttattctagataatgatgctaca
aatcaagatgaaactattacaactaataaagaagcttctgtagcaataggagagggagct
aaatcaacaggatttgcttcaatagcaataggagggtcttataatagacctaaatatgaa
aatggagttctgaaaacggctggaattggagctgctgaagcgacaggagatggagcagtt
gctcttggtaattcaacaaaagcagaagctaaaggagcatttgcagtaggattgttagct
agggctgcaggagagttctcttctgcaattggatattctgcaagtgccacagcagaagga
gcaagagctctagggatatatactgaagcttcaggagtttattcaacgagtatgggttat
aaaacaacatcttctggttcttcatcgttagcaacaggagcatatacaacagcttcttgg
aaatattcggtagctatgggattaaaatccaaagcagtaggaaatggttcgcttgcatta
ggtggatatactaatgatagttctgatattttagaaggtggacaagcctacacagcaggc
tcaatggcactcggaactgggacagttgcaggtattgaaaatggcacagaagaagccgtc
gcaatgggctatcgtgctaaagccgttgcagataacacccttgcattaggttttgatgct
aaggctgaacatgaaaactcagtggccttaggttcaaacgcagaaaccaaagcctttaca
caagtagatgaaacagaggctatcaatggacttaaatataaagacttcactggttttgcg
gatggtgtggtgtctgtgggtaaagattatcacgaaaaacaaatcatcaatgttgcaccg
ggtaaaattgctcaaacctcaaccgatgcgatcaatggttcacaactttttgctaccaat
aaagccattggtaatgttgcaaaatcggttaaaaataacttcggtggtaatgctgcatta
aatgaagatgggaacattacatttaccaatattgggggaacaggcaaaggcactattcac
gaagcgattggggatataaaaaccactgccgatgcagccaaacgtaaaacccttgcaaat
agcactacactgaataacaaagcagataaaaatgcaggtaatttaggggcagcagaagta
aatgcttggacaaccaagttaaatacaggtgcaaatatcaccgcaccaacaggcaagtta
gtgactgattcgcaagtaaaaactgcactcgacacaaaactggatgcggatgatatcacc
agcaaggataaaacagtcactatcgacaccacaaccactgcaggtaaagtggatttaaaa
gtgaatcttgatggaacgactttaactaaagacggaaatggtgtaatcagccttgcagac
aacgcagtgacaacggctaagattttagacggtaaggtcacaaaagtgaagttagcggga
gatgtcactaatattctggataaagttggagcaggcgccgttgcagatggtaataccaat
actgtgacaggtgatgtggttaaaacttacgttgatacagcgacagcaggtaaacttgac
aaaggtgacctgaatgtgattgaaagtgatgatatcacagtaagcaatgctggcgattta
actaaaggtaacgtgaagttaagccttaaagccgataaagtgaaagagttagcaggaaca
acagaccttgcaactacttacttaaacgtaagcggcgcgaatgtaggtgacaaagtgacc
tttggtggcaatgtaggtacagcgaccttagcgaatacgactgaattagcacaaatcaaa
gcggtgaaagcggtagatgataaagtgacaggtaatactcaaactattactaatttagga
gaccaaatcactaacgtaggcaaaacctcgaaagaagaagtggcgattgttgaaaacagt
ggtttaacactggcgaaaacagctgcaacggcaaataaaggggcggtgtatacgttaggc
ttagatgcggcgaaagtgaaagaggtggcaggaaccacgacgcttgcagcagatttagcg
gcgaaagcgaataaagatgcgtccaacttaactgatggcgataaagcggattggaaacgc
gcgcttgatcttggtaatgtgttaacaagtgcgaatttagctgaccgtttattaataaca
ggttctaacgttggcagtgatgacaataaagtcaaactgggtaaaaacgtaggtaaaggt
gagattactggtgagaccacccaacttgttcaagaaaaagcggttaaaacctatgttgat
acagcgattgataaagttgggaaagctaaagacggtaaagacggtcatatcggtgttgac
ggcaaagatggcaaagatggttcaatcggcttaagtggaaaagatggcattaccgttaaa
ggaaaagacggtgaaaatggcgtatcaatccacggtgatgatggcatcagtattaaaggt
gaagatggtaaaacattggttactcttggtaaggatggtcaaaatggtgttatagggctt
caaggagcaccaggtaaaaatggtgcagacggcaaattctatgacatcagtatccaaaat
ggaaaaggtggcttagatggcaccacaactgacagaatcgtttatgttgataaagcaacg
ggagacaaaaaggaagttgccacactggatgatggcttagctttccaaggtaatgatgcg
tcgaagaaagtgacgacagcccttaatggcaccttggtgattgaaggacaaaaaggcaca
gacccagcgaagaacttaacgaaagactctgactttgcagcagataacatctttgtcgat
accacagatggcaagttagaaatcaaactggcgaaaaaactgcaaggtgttgagggtatt
ggcattgcaggtaaagacggtttaagtattgcagggaaagatggagcaaatggcttaaac
ggtaaagacggtgaaaatgcagttgcgattaatggaaaagacggaatttcaatcaaagga
aaagatggaaaagacggcgtatctattaaaggtgaagacggtatttccattaaaggtaaa
gatggcatggatggcttaaacggcatcgggctcaatggcaaagatggaattacggttaat
ggaaaagacggtaaagacggaaaagattccattgcgattaacggcaaagacggcatttca
atcaaaggtgaaaatggcaaagatggcatttccattaaaggtgaagacggcattgcggta
aatggtaaaaatggaaaagatggcgtatcaatccacggtgatgatggcatcagtattaaa
ggtgaagatggtaaaacattggttactcctggtaaggatggtcaaaatggtgttataggg
cttcaaggagcaccaggtaaaaatggtgcagacggcaaattctatgacatcagtatccaa
aatggaaaagatggcttagatggcaccacaactgacagaatcgtttatgttgataaagca
acgggagaaaaaaggaagttgccacactggatgatggcttag
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