Phocoenobacter skyensis: A6B44_07405
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Entry
A6B44_07405 CDS
T06668
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psky
Phocoenobacter skyensis
Pathway
psky00470
D-Amino acid metabolism
psky00550
Peptidoglycan biosynthesis
psky01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psky00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A6B44_07405 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A6B44_07405 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psky01011
]
A6B44_07405 (murD)
Enzymes [BR:
psky01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
A6B44_07405 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
psky01011
]
Precursor biosynthesis
Amino acid ligase
A6B44_07405 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QLB23035
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Position
complement(1572356..1573663)
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AA seq
435 aa
AA seq
DB search
MRNQYQGKKVTIVGLGQTGLSCVDYFLDKKVELRVIDTRPHPTGVDKLPKEIALHTGSLN
LDWLLNSDLVVISPGLALATPEIQQVLKAGIEVVGDIELFCREATAPIIAITGSNGKSTV
TALTADMARQAGLKVGMGGNIGVPALTLLKKEYELYVLELSSFQLETTFSLKAKAATVLN
ICEDHMDRYESLEGYRQAKLRIYHNAENVIVNSEDKQTYPDEAVSSEIDFAENGARYSVK
NGQLYSYQRPMIEIEKLKITGRHNMLNALAAVALAEAANIPSHGIINALYTYGGLDHRFQ
LVPTNDGIIWINDSKATNVGSTVAALTGLNVEGTLYLLLGGDGKGADFSELTPLINQPYI
QCYCFGKDGAKLAQLTEQSVIVESMIEAVAQIRPRLRQGDMVLLSPACASLDQFPNFEVR
GQKFMELALGDGRYV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatcaataccaaggaaaaaaagtgactattgttggcttaggtcaaacaggtctt
tcttgtgtcgattattttttagataaaaaagttgagttacgagtgattgatactcgacct
catccgactggtgtggataaattgccaaaagagattgcattacacacgggtagcttaaat
ttggattggttattaaactctgatttagtggtgattagccctggtcttgcattagcaaca
cctgaaattcaacaggttttaaaagcaggtattgaagtcgttggagatattgaattattt
tgccgtgaagcgactgcaccaattattgcgattactggttctaacggtaaaagtactgtg
actgcattaaccgcagatatggcaagacaagcagggttaaaagtgggtatgggtggaaat
attggtgtgcctgcgttaacgttattaaaaaaagagtatgaattatatgtgttagagcta
tctagttttcaattagaaaccacgttttcccttaaagcaaaagcagcgacagtgttgaat
atttgtgaagatcatatggatcgttatgaatcattagaagggtatcgtcaggcaaaattg
cgaatttaccataatgctgaaaatgtgattgttaatagcgaagataaacaaacttatcct
gatgaagcggttagttctgagatagattttgcagaaaatggtgcaaggtattctgttaaa
aacggacagttatattcttatcaaagaccaatgatagagattgaaaaattaaaaataaca
gggcgtcataatatgttaaatgctctggcagcggtcgctttggcagaggcagctaacatt
ccctctcacggaataattaacgcattatacacttacggtggtttagatcatcgctttcag
ctagtgccgactaatgatggtattatttggattaacgattcgaaagcgaccaatgttggc
agtactgttgctgccttaacaggtttgaacgttgaagggacattatatttattattaggt
ggtgatggtaaaggggctgatttttcagaattaactccgttaattaatcaaccgtatatt
cagtgttattgttttggaaaagacggcgctaaactggctcagttaacagagcaaagtgtg
atagtagagtcaatgatagaggcggtggcgcagattcgtccacgtttaagacaaggggat
atggtattgctgtcacctgcttgtgcaagtttagatcaatttcctaactttgaagtacga
ggacaaaaatttatggaattagcattaggagatgggcgttatgtttga
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