Phocoenobacter skyensis: A6B44_09605
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Entry
A6B44_09605 CDS
T06668
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psky
Phocoenobacter skyensis
Pathway
psky03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psky00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6B44_09605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psky03019
]
A6B44_09605
03110 Chaperones and folding catalysts [BR:
psky03110
]
A6B44_09605
03029 Mitochondrial biogenesis [BR:
psky03029
]
A6B44_09605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psky04147
]
A6B44_09605
Enzymes [BR:
psky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A6B44_09605
Messenger RNA biogenesis [BR:
psky03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A6B44_09605
Chaperones and folding catalysts [BR:
psky03110
]
Heat shock proteins
HSP60 / Chaperonin
A6B44_09605
Mitochondrial biogenesis [BR:
psky03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A6B44_09605
Exosome [BR:
psky04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A6B44_09605
Exosomal proteins of other body fluids (saliva and urine)
A6B44_09605
Exosomal proteins of breast cancer cells
A6B44_09605
Exosomal proteins of colorectal cancer cells
A6B44_09605
Exosomal proteins of bladder cancer cells
A6B44_09605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QLB23441
LinkDB
All DBs
Position
2007918..2009564
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVVLDKSFGAPAITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIISEGLKSVAAGMNPMDLKRGI
DKAVISVVEELKNLSKPCETSKEIEQVGTISANSDSTVGQLIAQAMEKVGKEGVITVEDG
SGLEDELAVVEGMQFDRGYLSPYFINKPDAGTVELENPFILLVDKKISNIRELLPTLEAV
AKVNKPLLIIAEDLEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGMELEKAGLEELGQAKRVVINKDNTTIIDGIGDEEQIKGRVAQIRQQIEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAASKVAESLKGDNEDQNVGIKLALRAMEAPLRQIVENAGEEASVVARNVKDGSGNFGYN
ASTENYGDMLEMGILDPTKVTRSALQFAGSIAGLMITTECMVTDLPKEESADLGAAGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagatgtaaaatttggtaatgatgctcgtgttaaaatgcttaaaggtgta
aatgttttagccgatgcagtgaaagtcactctaggtcctaagggacgcaatgttgtgtta
gataaatcctttggagcaccagccatcacaaaagatggtgtatctgttgcacgtgaaatt
gagttagaagataaattcgaaaatatgggtgctcaaatggtgaaagaggttgcctctaaa
gccaatgacgaagcaggtgacggtacaacaacagcaacagtacttgctcaagcaattatc
agtgaaggtttaaaatctgtggcagcaggtatgaacccaatggatttaaaacgtggtatt
gataaagcggtaatttctgtagtagaagagttaaaaaatctgtctaaaccttgtgaaacc
tcaaaagaaatcgaacaagtgggtacaatttctgcaaactctgattcgactgtaggtcag
ttaattgcacaagcaatggaaaaagtaggtaaagagggtgtaatcactgttgaagatggt
tctggcttagaagatgagttagcagtggttgaaggtatgcaatttgatcgtggttactta
tcaccatatttcatcaacaaaccagatgcaggcaccgttgaattagaaaatccatttatt
cttttagtagataaaaaaatctcgaatattcgtgaattattaccaacattagaagctgtg
gctaaagtaaataaaccattgttaatcattgcagaagatcttgaaggtgaagcattagca
acattagttgtgaacaatatgcgtggtatcgtgaaagtggctgccgtgaaagctccaggt
tttggtgatcgtcgtaaagcaatgctgcaagatatcgcaattctaactgcaggtactgtg
atttcagaagaaatcggtatggagttagaaaaagcaggtcttgaagaattaggtcaagct
aaacgtgtagtaattaacaaagataataccactatcattgatggtattggtgatgaagag
caaatcaaaggtcgagttgctcaaattcgtcaacaaattgaagaatctacttcagattac
gataaagaaaaacttcaagagcgtatggctaagttagcgggcggtgtggcagtaattaaa
gtaggtgctgcgacagaagttgaaatgaaagagaaaaaagaccgtgttgatgatgcactt
cacgcaactcgagctgcagttgaagaaggtattgttgctggtggtggtgttgcattagtt
cgtgcagcatcaaaagtagcagaaagcttaaaaggtgacaatgaagatcaaaatgtgggt
atcaaacttgcattacgagcaatggaagcgccacttcgtcaaatcgttgaaaacgctggt
gaagaagcctctgttgtagctcgtaacgtaaaagatggctcaggtaactttggttataat
gcaagtactgaaaactacggcgatatgttagaaatgggtatcttagatccaactaaagta
acacgtagtgcattacaatttgcaggttcaattgcaggtctaatgattaccactgaatgt
atggttaccgatcttccaaaagaagaaagcgctgatttaggtgctgctggaatgggcggt
atgggaggaatgggtggaatgatgtaa
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