Pirellula staleyi: Psta_0039
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Entry
Psta_0039 CDS
T01147
Name
(GenBank) conserved hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
psl
Pirellula staleyi
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psl03016
]
Psta_0039
Enzymes [BR:
psl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Psta_0039
Transfer RNA biogenesis [BR:
psl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Psta_0039
Prokaryotic type
Psta_0039
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
ADB14736
UniProt:
D2QZH8
LinkDB
All DBs
Position
complement(44669..45508)
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AA seq
279 aa
AA seq
DB search
MTANAPFHSIQHQDLTIEGYSRAAVQSYWRIPEMKIGFDLGAQPWDFMGTSTWFVTHTHL
DHIAALPVYVARRRMMKMDPPLIYVPEHSRALCEEVLKVFSRLDRGRLPCDLRGVKPGDE
IELSRELVVTASATKHTVPSVGYVVWQRRNKLKDEYQGLSGEQIRDIRLSGMEVTEEKRF
PQLAYLGDSSPEGLDNCPAMYEAKILITEMTFVAPGHRKEKIHKHGHMHLDDYVERKDRF
KNELIIAAHASTRYQDRQVKHYVQKALPDMLGGRLKLWL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaacgctccttttcattcgatccagcaccaagatctcacgatcgaaggctac
tcgcgcgctgccgtgcagtcgtactggcgcatccccgaaatgaagatcggcttcgatctc
ggcgcacagccgtgggacttcatggggacgagcacctggtttgtcacccacacgcatctc
gatcacatcgccgcgctgccggtctacgtcgctcggcggcggatgatgaagatggacccg
ccgctgatctacgttcccgaacattcgcgggctttgtgcgaagaggtgctgaaggtcttc
agtcgactcgatcggggccgcttaccgtgcgatctgcggggcgtaaagccgggggatgaa
atcgagctctcgcgcgaactagttgtcaccgcttccgccaccaagcacaccgttccgagt
gtcggctatgtcgtgtggcagcgccgcaataagctcaaggacgagtatcaaggtctcagc
ggcgagcagattcgcgacattcgtctgagtggcatggaagtgacggaagaaaaacgattt
ccgcagctcgcctacctcggggatagctcgcccgaagggctcgacaattgcccggcgatg
tacgaggccaagatcctgatcaccgagatgacgttcgtggctccggggcatcggaaagag
aaaatccacaagcatgggcacatgcatttggatgactacgtcgagcgcaaggatcgcttc
aagaacgagctgatcatcgccgcgcatgccagcacgcgctatcaggatcggcaagtgaag
cactatgtgcagaaggctttgccagacatgctcggtggtcgtttaaagctgtggctctaa
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integrated database retrieval system
