Pirellula staleyi: Psta_0151
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Entry
Psta_0151 CDS
T01147
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psl
Pirellula staleyi
Pathway
psl00300
Lysine biosynthesis
psl00470
D-Amino acid metabolism
psl01100
Metabolic pathways
psl01110
Biosynthesis of secondary metabolites
psl01120
Microbial metabolism in diverse environments
psl01230
Biosynthesis of amino acids
Module
psl_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Psta_0151
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Psta_0151
Enzymes [BR:
psl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Psta_0151
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Phage_phiTE_015
HopBA1
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
ADB14847
UniProt:
D2R0H9
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All DBs
Position
complement(194754..196022)
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AA seq
422 aa
AA seq
DB search
MPATPTFSTIRHEIAGVSVADIARDYGTPTYVYDAAIIEERIDDLAKFDVIRYAQKACSN
IAILDLMRKKGVVVDAVSTGEIHRAMAAGYKPGSKNHEIVYTADIFDRDALATVVKLDIP
VNCGSPDMLDQLGAVKPGAHVTLRINPGFGHGHSQKTNTGGEQSKHGIWHEQLTDCLQKA
DRHGLMISGIHMHIGSGTDLEHLSQVCSAMERVVLEVGRSITTISAGGGLPIPYNDKQTY
VDLDQYFELWDASRKRLEAALGHKISLEIEPGRYLVAESGYLVSEIRAIKQMGNNTFYLL
DAGFNNLARPILYGSYHPMSIVPLDAGERADRDVVVGGPLCESGDIFTQEEGGYVCKRSL
PSARIGEYLVLERAGAYGFVMASNYNSKPLAAEVLIKNGTAHLVRERQTPADLIRGERLL
DG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccacacctactttttctaccatccgtcacgaaatcgccggtgtgagtgtcgcc
gacatcgcgcgcgactatggcacaccgacctacgtttacgacgctgcgatcatcgaagag
cggatcgacgacctggccaagttcgacgtcattcgctacgcccaaaaagcgtgttcgaac
atcgccatcctcgatctgatgcgcaaaaaaggtgtggtggtcgatgcggtgagcaccggc
gagattcaccgcgcgatggcggctggctataagccgggaagcaagaatcacgagattgtg
tacaccgccgatattttcgatcgcgacgcgctcgccacggtggtgaaactcgatattccg
gtgaactgcggttcgcccgacatgctcgaccaactcggcgcagtgaagcccggcgcgcat
gtcacgcttcgtatcaatccaggctttggacatgggcatagccaaaagaccaacaccggt
ggcgagcagagcaagcatggcatttggcacgagcagctgaccgactgcctgcagaaggcc
gaccgccatgggctgatgatcagcggcatccacatgcacatcggcagtggcaccgacctc
gaacatctgtcgcaagtttgttcggcgatggaacgcgtcgtgctggaagtgggtcgcagc
atcaccacgatcagcgccggtggtggtttgccgattccttacaacgacaagcagacctac
gtcgacctcgatcagtattttgaactgtgggatgcttcgcgcaaacgtctcgaagcagcc
ctgggacacaagatttcgctcgagatcgagccggggcgttacttggtagccgagagtggc
tatctcgtctctgagattcgtgcgatcaagcagatgggcaacaacaccttctatctgctc
gatgcgggctttaataacctcgcgcggccgatcctctacggctcgtatcacccgatgtcg
attgtccctctcgatgcaggcgaacgcgccgatcgcgatgtggtggtgggtggtccgctg
tgtgaatcaggcgacatcttcacgcaggaggaagggggctacgtttgcaagcgttccctt
ccgtcggctcggatcggcgagtatctcgttctcgaacgagctggcgcttacggttttgtg
atggcgtcgaactacaacagcaaaccgctcgcagcggaagtgctgatcaagaatggcacc
gcgcatctggtgcgtgaacgtcaaaccccggccgatctgatccgtggcgaacggttgctc
gacgggtaa
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