Pirellula staleyi: Psta_0338
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Entry
Psta_0338 CDS
T01147
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
psl
Pirellula staleyi
Pathway
psl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Psta_0338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psl03400
]
Psta_0338
Enzymes [BR:
psl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Psta_0338
DNA repair and recombination proteins [BR:
psl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Psta_0338
Prokaryotic type
Psta_0338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
CSPP1_C
Motif
Other DBs
NCBI-ProteinID:
ADB15028
UniProt:
D2R2B9
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All DBs
Position
complement(436841..438037)
Genome browser
AA seq
398 aa
AA seq
DB search
MPQRRASREPDSPSDKTWIETDRKALARFQQRMLAWFAEHARDLPWRRSRDLYRIWISEV
MLQQTQVATVIDYFQRFLVEFPTVVHLAEADEQQVLRQWEGLGYYRRARSLHAAAKKIVH
DFRGQFPETLDEVMSLPGIGRYTAGAILSIGLDAKLPILEANTIRVYARLAGYTREATST
AGQKFLWNIAEQILPDKKVGFFNQAMMELGSALCTPRTPSCDQCPASTWCVARREQAVEQ
IPLLSKRMVYEYLTEVAVLVVDRQQVLLRQCQPGERWAGLWDFPRFSLEKTMLGAKSTTE
TDLENYLIERVESLTGIASMIHDQWPSLKHGVTKYRITLRPMVASLREAGSKSSRAKQKL
AEHCKWTRIDALDDEPLSVTGRKLAQLLAKYDQTKKLF
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagcgccgtgcttcccgcgaacctgactcgccgagcgacaagacttggatcgag
accgatcgaaaagcgctggcgcgatttcagcagcgtatgctcgcttggtttgccgagcat
gcgcgcgatttaccttggcggcgctcacgcgatctctatcgcatctggatcagcgaagtg
atgctgcagcagacgcaggtagccacggtgatcgactattttcagcgatttctggtggaa
tttccgacggtagtgcatctcgctgaagctgacgagcagcaagtgctgcgacagtgggaa
gggctgggctactaccgccgcgcacggagcttgcatgccgcggccaagaagattgtgcac
gattttcgcggccagtttcccgaaacgctcgacgaggtgatgtcgctcccaggaattggg
cgttataccgctggtgcaatcctctcgattggtctcgacgcgaagctgccgattttggaa
gcgaacacgattcgtgtctacgcgcggctcgcgggctacacgcgcgaagcgacgtcgaca
gcggggcagaaattcctgtggaacatcgccgagcaaatcctgcccgataaaaaggtcggc
ttcttcaaccaggcgatgatggagctagggagcgcgctctgcacgccacgaacaccgtcg
tgcgatcagtgcccggcaagcacttggtgtgtcgcgcgccgcgagcaagcggtcgagcaa
attccgctcctctccaagcggatggtgtacgaatatctcactgaagtggcggtgctggtg
gtagatcgacagcaggtgctgctgcgtcaatgtcagcccggtgagcgctgggctggtttg
tgggattttcctcgtttttcgctcgaaaaaacgatgcttggcgcaaaatccactacagag
accgacctcgaaaactatctcatcgagcgtgtagaatcgctcaccggaattgcgtcgatg
attcacgatcagtggccatcgctgaagcatggcgtgaccaaatatcgcatcacgttgcgg
ccgatggtggcgagtctgcgtgaggcagggagcaagtcgtcgcgggccaagcagaagctc
gccgagcattgcaaatggacccgcatcgatgcgctcgatgacgagccactgagtgtcacg
ggacgcaaactggcccagttacttgccaagtatgaccagacgaagaagctgttctaa
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