Pirellula staleyi: Psta_0363
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Entry
Psta_0363 CDS
T01147
Name
(GenBank) Sigma 54 interacting domain protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
psl
Pirellula staleyi
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psl03000
]
Psta_0363
Transcription factors [BR:
psl03000
]
Prokaryotic type
Other transcription factors
Others
Psta_0363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA
AAA_16
MCM
AAA_30
AAA_22
AAA_19
NACHT
AAA_14
NTPase_1
ATPase_2
ABC_tran
AAA_2
T2SSE
AAA_29
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ADB15053
UniProt:
D2R2E4
LinkDB
All DBs
Position
469344..470966
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AA seq
540 aa
AA seq
DB search
MTKQRKLVVVGIFGTRLDAGHAKSRWNRWRPTVSVCQHEDLLVDRLELIHQPGEEAVADT
LVRDIASVSPETEVRLHPLKFNDAWDFEEVFAALHHWSRGMNFRPDTEDYLIHITTGSHV
QQICLFLLAESRHIPGQLLQSSPPLRAAEATGAYRIIDLDLSKYDALATRFAEEQQEGLS
FLKSGIETRSRTFNTLIERIERVAIASSAPLLITGPTGAGKSQLAARIFELKRRRGQVRG
SFVEVNCATLRGDQAMSSLFGHAKGAFTGATTPRAGLLMAADQGILFLDEIGELGRDEQA
TLLRAIEEKRFLPVGCDRETASDFQLIAGTNRDLAADVHAGRFREDLLARINLWTFRLPA
LAERREDIEPNIQYELDRYAARTGQQVTINKEARQKFLQFAQSPAATWSANFRDLNAAIT
RMATLAPSGRITTDEVHDEIARLESAWQFSGSDSGKSSRDDLSLLVELLGDEKVATIDLF
DRAQLAAVVRICRESASLSDAGRKLFAISRLAKSQPNDADRLRKFLARFELSWTDFAASR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacaacgaaaactggtcgtggtggggatctttgggacgcggctggacgccggg
catgccaaatcgcgctggaaccgctggcgccccactgtctcggtttgccagcacgaagat
ttgctcgtcgataggctagaactaattcatcagccgggcgaagaagctgtcgccgacaca
ctggttcgggacatcgccagtgtctcgccggaaacggaagtccgtctccatccactgaag
tttaacgacgcttgggatttcgaagaggtctttgccgccctccatcactggtcgcgcggg
atgaacttccgccccgatacggaagactatttgatccacatcaccaccgggtcgcatgtc
cagcaaatctgcctattcctcctcgccgaatcgcggcacatccctggacaactcctgcag
tcctccccgccgctgcgagccgctgaagcgaccggcgcctatcgcatcatcgatctcgat
ctctcgaagtacgatgcccttgcgacccgctttgccgaagaacagcaggaaggactctcg
ttcctgaaatcgggaatcgagacccgcagccgcacgttcaacaccctcatcgagcggatc
gagcgagtcgctattgccagcagcgcgccactcttgatcaccggtcccaccggcgcgggc
aaatcgcagctggcagcgcggatcttcgaactcaagcgacgtcgtggccaagtgcgcggc
agtttcgtcgaagtgaactgtgccactttgcgcggcgatcaagccatgtcatcgctcttt
ggacatgccaaaggggcattcactggcgcgacgaccccgcgtgctggattgcttatggcc
gctgatcaagggatcttattcctcgatgaaatcggcgagcttgggcgcgacgagcaagcg
acgctgctgcgcgcgatcgaagaaaaacgctttctcccagtcggctgcgatcgagaaaca
gcgagcgactttcagctgattgcaggaaccaatcgcgatcttgcagcggatgtccacgcg
ggacgctttcgcgaagatttgctcgcgcgcatcaacctatggaccttccgactgccagcc
ctcgccgagcgccgcgaggatatcgaacccaacattcagtatgaactcgaccgctacgcc
gcacggaccggacagcaggtgacgatcaataaagaagcgcgacaaaagttcctgcagttt
gcgcagtctccggctgcaacatggtcggccaattttcgcgacctcaatgcggcgatcaca
cgcatggcgacacttgcccccagtggccggatcaccaccgacgaagtgcacgacgaaatc
gctcgcctcgaaagtgcctggcaattttcggggagtgattcaggcaagtcatcgcgcgac
gatctgtcgctgctcgtcgaactcctcggcgacgagaaagtcgcaacgatcgatctgttc
gatcgcgcgcagctcgctgctgtcgtgcgaatctgccgcgaaagcgcgtcactatccgat
gctggccggaaactgtttgctatctcacggctagccaaatcgcagcccaacgatgccgat
cgactccgcaaattcctagcccgttttgagcttagctggaccgatttcgctgcgtcgcgg
taa
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