Pirellula staleyi: Psta_0760
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Entry
Psta_0760 CDS
T01147
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psl
Pirellula staleyi
Pathway
psl03420
Nucleotide excision repair
psl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Psta_0760
03430 Mismatch repair
Psta_0760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psl03400
]
Psta_0760
Enzymes [BR:
psl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Psta_0760
DNA repair and recombination proteins [BR:
psl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psta_0760
MMR (mismatch excision repair)
Other MMR factors
Psta_0760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ADB15445
UniProt:
D2R5I6
LinkDB
All DBs
Position
928142..930544
Genome browser
AA seq
800 aa
AA seq
DB search
MSLFPMDRLSDAASDHALRSPLLDSLTDAQRAAVCHIEGPLLILAGPGSGKTRVVTHRVA
WMLASGIPARQILALTFTNKAADEMRGRLERLAPRQAVWMGTFHRFCARMLRSYAELVGL
RENFSIYDTDDSRKILQIALDEEGIDLTHTSPDAIAQAISWAKNNLVTADRYEPRRGHAI
GGIVEKVYPTYQKLMLRSSAVDFDDLLVHVAILLKENPEVRRQLDERYRYIMVDEYQDTN
LAQYTIVRALSIDHPNLAVTGDPDQSIYGWRGANLSNILEFEKDYPKVKVVRLEQNYRST
KSILHIADQLIRHNIRRKEKDLFTDNPQGNRVRLATFPTQRDEAETIAEEIAHEVRTGKR
RPRDFAIFYRTNALSRQIEHALREQVIPYQIVNGLEFYQRKEIKDVLAYLQLVNNPRSDA
ALLRIINTPTRGIGKSTIAKIQEVARDRAIPLLDAARMAGTISGLAKKSAVAVAKFVAML
DLIGTKATAPVEELVGYVLTETGYREVLENSEAEEDHERLANLEELLTAASEFDLRNPGG
AGLEQFLEDSSLVADTDAFESDSDKVTMMTLHAAKGLEFPAVYIVACEEGLLPHERSRRD
EEKLEEERRLLFVGITRAMQDLTLTWAQYRMFRGQQAPAVASSFLMELPRHEMELIGGNM
GRGSAPRYLAWDEESQLSPEDDDLEFPPREQDALIDAPMYDDVNQLEPEEMQTRKAKESK
TFSSGIVTAADLLAGKSPSGGISPYAFKHGMMVQHPEYGPGQIVALSGNGAKRVANVRFM
EGGEERKFVIVHSKLTPLTE
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgttcccgatggatcgactgagcgatgctgcgagtgaccacgcgctgcgttct
cccctgctcgactcgctgaccgatgcgcagcgggctgctgtttgccacatcgaaggtccg
ctgctgattctcgccggacctggtagtggcaagactcgcgtcgtcactcaccgcgtagct
tggatgctcgccagtggcattcccgcccggcaaatcttggccctcacattcacgaacaaa
gcggccgatgaaatgcgcggccgcctcgaacgtctcgcgccgcgacaagcggtttggatg
ggaacgttccatcgcttctgcgcgcgaatgctgcgttcctacgccgagctggtgggacta
cgagaaaacttctcgatctacgacaccgacgacagccgcaagatcctgcagatcgcgctc
gacgaagaagggatcgatctcacgcacacttcgcccgacgcgatcgcacaggccatcagt
tgggccaagaataatctggtaacggcagatcgctacgaacctcgtcgcggtcatgcgatt
ggaggtatcgtcgagaaggtctacccgacctatcaaaaactgatgctccgctcgagcgcc
gtcgacttcgacgacctcctcgtgcatgtcgctatcttgctgaaagagaatcctgaagtt
cgtcgtcaactcgatgagcgctatcgctacatcatggtcgacgagtatcaagacacaaat
ctcgcgcagtacaccatcgttcgcgccctttcgatcgatcatccgaacctcgctgtcact
ggcgatcccgaccaatcgatttacggctggcgtggcgcgaatctctcgaacattctcgag
ttcgagaaagattatccgaaggtcaaagtcgttcggctcgaacaaaattatcggagtacg
aaatcgatcctgcatatcgccgatcagttgattcgtcacaacatccggcgcaaagaaaaa
gaccttttcaccgataatccccagggaaatcgcgttcggcttgccacgtttccaacgcag
cgcgatgaagcggaaaccattgccgaagagattgctcacgaggttcgtacagggaagcga
cgcccgcgcgattttgcgatcttctatcgcaccaacgcgctctcgcgacaaatcgaacac
gcgcttcgcgagcaagtgattccctatcaaatcgtgaatgggctcgagttctatcagcgc
aaagaaatcaaagatgtgctggcctacctgcaactcgtgaacaacccgcgcagcgatgcc
gccttgctccggatcatcaacaccccaacacgtggcatcggcaaaagcacgatcgccaag
attcaagaggtggctcgcgaccgcgctattccgctgctcgatgcggcgcgcatggcgggg
accatctcgggactcgccaaaaaatcggcggtggcagttgccaagtttgtagcgatgctc
gacctgatcggaaccaaagccactgcgccggttgaagaactcgtgggctatgtcctgacc
gagaccggttatcgcgaagttctagagaacagcgaagcagaagaagatcacgagcgcctg
gcgaacctcgaagaacttctgacagccgccagtgagttcgatttgcgaaatccgggagga
gcggggctcgagcagtttctcgaagattcgtcgctggtagccgatacagatgcatttgaa
tccgacagcgacaaggtcaccatgatgaccctgcatgccgccaaaggactcgaatttcca
gcggtttacatcgttgcctgcgaagaaggtttgttgccacacgagcggagtcgtcgcgat
gaagagaagctcgaagaagagcggcggctgttgttcgtcggcatcacgcgcgcgatgcaa
gacctcaccctcacgtgggctcagtaccgcatgttccgaggtcaacaagcgcccgcagtc
gcgagttcgttcctcatggaactcccccgacacgagatggaactgatcggtgggaacatg
ggacgcggaagtgcgccgcgctatcttgcctgggacgaagagagtcagctctcgccggag
gatgatgacctggagtttccaccgcgtgagcaggatgcactgatcgacgcgccgatgtac
gacgatgtcaaccaactcgagcccgaagagatgcagactcgcaaggcgaaagaatccaaa
acctttagttcggggatcgtaacagctgcggatcttttggctggcaagtctccctcggga
ggaatctcgccgtatgctttcaaacatggaatgatggtgcaacatcccgagtatggccct
ggtcaaatcgtggccttgtcgggcaacggcgcgaaacgggttgcaaacgtgcgcttcatg
gaaggtggcgaagagcgaaagtttgtgatcgtgcacagcaaactcacaccactcaccgag
tag
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integrated database retrieval system
