Pirellula staleyi: Psta_1935
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Entry
Psta_1935 CDS
T01147
Name
(GenBank) outer membrane adhesin like proteiin
KO
K20276
large repetitive protein
Organism
psl
Pirellula staleyi
Pathway
psl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psta_1935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
Dockerin_1
SdrD_B
Cadherin_3
SpaA
Dioxygenase_C
Adenine_deam_C
Motif
Other DBs
NCBI-ProteinID:
ADB16609
UniProt:
D2R0L1
LinkDB
All DBs
Position
2480849..2485834
Genome browser
AA seq
1661 aa
AA seq
DB search
MTKHRRRSPLTAGSRSLSTARKAVAVRKLFAAERLESRSMMAGDLFVSDYWNNMKPTDVN
GDGNVTPFDALAVINELNQRGARSLGIRPATVSAGGEGESSPDDFFFDVNNDGMVTPFDA
LAVINTLNAEGEDGDDLMAFTIHAYSPDTDTPITTLARGEEFDLVVKVDDLRLGGSGVFF
GQVDILHDRSKADLVTREVTLLSFTPEVSGGSFTLTFNGQTTAPINFSSTQSTMSNRIEN
ALLALPNIDPFDVDVTVNYADVFSTRQYWVTYKGQFGGIDLPNDILTANTTGLTGTGAAL
NISTFADSNVANSNSVRESFRTYVIPDVVDELSYIANLSASLGTDRFNDVSAQASLGTPP
GSDPVELVRARVRATDGGTLTFTLDRSSLGLSEVSLFNFNRPLLESEIAFNIPAVTLTVT
EAATANPDVATVAEGNATGVVISPLGNDTVQTGTKQIPAFTSFTTVNGGLVERLNSTQIR
YTNTTNFAGVDEFNYTLSNGLGATDTSTISVTVTGVNDAPVIGLPPAGQTTAEDTALLLT
GANVISISDVDILPSATMVATLSSSQGTFSLTSVPGVSISGNLSGSVNISGTLSAINSAL
ATLVFTPTSNFSGTATINVTANDGGSSGTGGALQTNSSFTVNVTAVNDGPGITALLSRTM
FEDEVLLLGSPTPITVSDVDVGAGLMSITVTAPNGTLTADMPAGTGGARSGQGTSTLTLT
GSLANLNAALLTLTYDPNNGFFSTETISLVVSDNGNTGTPGALTASADIVVNVQPTVRPR
ARDDVFSVAEGNTTQMDVLVNDEANIPDPTVYNRVLDSFDIDAMADINGTPTAVGTISRV
EAGLAGSADDLLLYTPKAGFEDFFGTVVFSYTMTDDKPGSIPVTAIVTLTVTNVNDAPVA
IDDSYFIDEDTTLIVPGSGNLDTLIANDEDVDGDNLSVTVTQLPTNGTLSWNPNGSFTYT
PNSNYNGVDEFSYTVSDGVITSNVATVSIFIAAVNDAPVGVVDSYTTLEDTTLNVNGTIA
FPSVLANDTDVENDPLTADLLTTTTRGTLTFNEADGTFTYVPTLNLNGPDSFTYRAFDGD
KYSAPVTVTINVTPVNDAPTATTDNYVVEERATLTVAAPGVLGNDVDTVEGSPLTAQLQS
STSNGTLNFNANGSFTYTPNNGFLGTDSFTYRASDGTAFSAITTVNILVTDVNDPPTANP
DSYTTAEDTALIVPGAGLLPTLLANDTDPESVNTSLTTLLVSGPTSGSLTLNGNGTFTYT
PATNFNGTATFTYRVSDGVLFSPPTTVTITVTPVNDAPVVTNKSILAVKDIADQDFIIVT
AADTDVENNNLTVVGLSTTNVVSASNSITTIAGGTVTISGTKGILYTPAAGYEGPDSFFY
TVSDGTAQVVAQVNVSVVSFRTTDVTGRVYYDADKDGGLDPAESGIAGAKVRIVGTDFQG
NSVSTGYVLTDENGYYLFEDVLPGSYHIEQLQPASLADGAETAGNGGALTLANDKIALSL
PILGIIGGSNGHLFGEKGIDPLALTSPAGLYAEMLASSGSNGVVFEFDISGNTTWFYKMQ
GWSGLEEITFQLSADRASGILTVNGGSPTTIYQAPQTGSASAPRFRILGTTHSGNIMIRL
DGTATGFGLNLAAAEGEPADPAMQQYEHAVDAAFGDESTWA
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcatcgtcgtcggtcgccactcacggctggttcacgctccctttcgaccgca
cgcaaagccgtggcggttcgcaagctgttcgctgccgaacggctagaaagtcgctcgatg
atggcgggcgacctgtttgtttcagactactggaacaacatgaagccgaccgacgtgaac
ggtgacggcaacgtcactccgtttgatgcgttggctgtcatcaatgagctcaatcagcgc
ggggcccgatcgctgggaattcgtcccgcgactgtctccgccggtggagaaggggaatcg
agccccgacgactttttcttcgacgtgaacaacgacggcatggtcacgccgtttgatgct
ctcgcggtgatcaacaccctgaacgccgaaggggaagatggggacgacctgatggcgttc
accatccatgcctattcgcccgacacagacaccccgatcaccacgctcgctcgcggcgaa
gagttcgatctggtggtgaaggtggacgacctccgtctcggtggcagcggtgtgttcttc
ggccaagtcgacattttgcacgatcgctcgaaggcagacctggtcactcgcgaagtgacg
ctcctgtctttcacgcctgaagtgtcgggcggttcgttcaccttgacattcaacggacaa
acaacggccccgattaacttctcgagcacgcagtcgacgatgtcgaatcgtatcgagaac
gcgctgctggccctgccgaacatcgatccctttgatgtcgatgtgaccgtgaactacgcg
gatgtgttcagcacgcgtcagtactgggtgacgtacaagggacagttcggcggcatcgat
ctgcccaacgacattctgactgccaacaccaccggtctcaccggcaccggcgctgcactc
aacatttcgacgtttgctgacagcaacgtggcgaattccaactcggtgcgagaatcgttc
cgcacctacgtgattccagatgtagtcgacgaattgtcgtacatcgcgaaccttagtgct
tcgctcggcaccgatcgcttcaacgatgttagcgcacaagccagcttgggaacacctccc
ggttccgaccccgtcgaactcgtgcgtgctcgcgtacgtgcgaccgatggtggcaccttg
accttcacgctcgatcgatcgtcgctgggtctttccgaagtcagtctgttcaacttcaat
cgtcctctgctcgagtcggaaattgccttcaacattccggctgtaacgctcacggttacc
gaagcagcgactgcgaatcccgacgtcgctacggttgcggaaggaaatgccaccggtgtg
gtgatctcgccacttggtaacgatacggttcaaaccggcaccaagcagattccagcgttc
acgtcgttcaccacggtcaatggtggccttgtcgagcgactcaacagcacccagattcgc
tataccaacacgaccaacttcgctggtgttgacgagtttaactacacgctctctaacggc
ctgggggctaccgataccagcacgatctcggtcacggtgaccggtgttaacgatgcacca
gtcatcggtttgccacccgctggtcagaccaccgcagaagatactgccttgctgctgacc
ggtgccaacgtcatctcgatcagcgacgtcgatattcttcctagcgccacgatggttgcc
acgctcagttcgagccaggggacattcagcttgacatcggttcccggtgtttcgatctca
ggcaacttgagtggtagtgtcaacattagcggcacactgtcggcgatcaacagtgctctg
gcgaccctcgtcttcacccccacgagtaactttagcggcacggccacgatcaatgtgacc
gccaacgatggtggctcgtcgggtacgggtggtgcgctgcagactaacagcagcttcacg
gtgaatgttacggcggtgaacgacggccccggcatcactgcgctcctgtcgcggacgatg
ttcgaagacgaagtgctcctcctgggaagtccaaccccaattacggtgagcgacgttgac
gtcggtgccgggctgatgtcgatcacggtcacggcacccaacggcaccctgacggcagac
atgcctgccggtaccggtggtgcacgatcgggccaaggaaccagcacactgacgctgacc
ggctcgctggcgaacctcaacgccgcgctcctgaccctcacctacgatccgaacaacgga
ttcttctcgaccgaaacgatctcgctggtcgtttccgacaatggtaacaccggaactccg
ggggctttgactgcgtcggccgacattgtggtcaacgtgcagccgaccgttcgtcctcgt
gctcgcgacgacgtcttcagtgtcgctgaaggtaacacgacccagatggatgtgctcgtc
aatgacgaagcgaacatccctgatccaacggtttacaaccgcgtgcttgattcgttcgat
atcgacgccatggcagatatcaacggcacccccacggccgtgggcacgatctcgcgcgtc
gaagctggtttggccggatctgccgatgatcttctgctctacacccccaaggcaggtttt
gaagacttctttggaacggtggtgttcagctacacgatgaccgacgacaagccagggagc
attcctgttacggcgatcgtcaccctcactgtcaccaacgtgaacgatgctccagttgct
atcgacgatagctacttcatcgacgaagacacgacgctgatcgtcccaggctctggaaac
ttggacaccctcatcgcgaacgacgaagatgtcgatggcgacaatctctcggtaactgtg
acccaactcccaaccaacggcacgctgagctggaaccccaacggttccttcacctacacg
cccaacagcaactacaacggcgtcgatgagttcagctacaccgtgagcgacggagtgatc
acctcgaacgtggcgacggtttcgattttcattgccgctgtgaacgatgccccggtggga
gttgtcgactcgtacaccacgctcgaagatacgaccctcaacgtcaacggcacgatcgca
ttcccttcggtcctcgcgaacgacaccgatgtggaaaacgaccctctgaccgctgatctg
ctcaccacgaccacacgtggcacgctgaccttcaacgaagcagatggaactttcacctac
gtcccaacgctgaacctgaacggtcctgacagcttcacgtaccgtgctttcgatggcgac
aagtactcggccccagtcacggtgacgatcaacgtcacgccggtcaacgatgcaccgacc
gccaccaccgacaactatgtggtggaagaacgtgcgaccctcactgtggccgctccgggc
gtgctggggaacgacgtcgacaccgtggaaggttcgcctctgacggctcagctccagagc
agtacctccaacggcacgttgaatttcaatgccaacggtagcttcacctacacgccgaac
aacggctttctaggtaccgatagcttcacctatcgtgcttcggatggaacggcattctcg
gccatcaccacggtgaatatcctggtgaccgacgtcaacgatccaccgaccgccaatccc
gattcgtacaccacggcggaagatacggctctgatcgttcctggtgctggcttgcttccc
acgctgctggctaacgacaccgatcctgaaagcgtgaacacctcgctgaccactttgctt
gtgagtggccccaccagtggctcgctcacgctgaatggaaatgggacgttcacctacacc
ccagctactaacttcaacggcacggccaccttcacctatcgcgtgagcgatggtgtcctc
ttctcaccacccaccacagtaacaatcactgttactccggtgaacgatgcccctgttgtc
actaacaagagcatcttggcagtgaaggatatcgccgaccaagatttcatcatcgtcacg
gcagctgatactgacgtcgaaaacaataacctcacggtcgtgggactcagcaccactaat
gtggtttcggcgtcgaactcgatcaccacgattgctggtggcaccgtcacgatcagcggt
acgaagggaattctctacacgcccgctgctggctatgaaggaccggacagcttcttctat
accgtttccgacggcactgctcaggtcgtggctcaggtgaatgtgagcgtcgtttcgttc
cgcaccaccgatgtcacgggacgtgtctactacgatgccgacaaggatggcggactcgac
ccagcagagtcgggtatcgcgggggcgaaggtccgaatcgtcggtaccgacttccagggg
aactcggtcagcaccggctatgtcctgaccgatgagaatggctactacttgtttgaagat
gttctcccaggtagttaccacatcgaacagctgcagcctgccagcctcgccgatggtgct
gaaactgccggcaacggtggagctctcacgctggcgaacgacaagatcgctctgtcgcta
ccaatcctgggtatcatcggcggctcgaacggtcacctgttcggcgagaagggtatcgat
ccgctggctctcacaagccccgcaggtctctatgcagagatgctcgcttcctcgggtagc
aacggagtggtgttcgaattcgatatcagtggcaacaccacttggttctataagatgcaa
ggttggagcggtctcgaagagatcaccttccagctgagtgccgatcgtgcttcgggcatc
ctgacggtcaacggcggttcgccgacgacgatctatcaggctccacagacaggaagtgcc
tcggcacctcgcttccgcatcctgggaaccacgcactcgggcaacatcatgattcgtctc
gacgggacagccaccggttttgggctgaacctggctgctgcggaaggtgaacctgccgac
ccagcgatgcagcagtacgagcacgctgtcgatgcagcctttggcgacgaatcgacctgg
gcctag
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integrated database retrieval system
