Pirellula staleyi: Psta_1955
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Entry
Psta_1955 CDS
T01147
Name
(GenBank) peptidyl-prolyl cis-trans isomerase cyclophilin type
KO
K20276
large repetitive protein
Organism
psl
Pirellula staleyi
Pathway
psl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psta_1955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
Pro_isomerase
SdrD_B
Big_13
He_PIG
SpaA
HYR
Ig_DR_A0283-like
Y_Y_Y
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
ADB16629
UniProt:
D2R0N1
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All DBs
Position
2516311..2521539
Genome browser
AA seq
1742 aa
AA seq
DB search
MTTMIHRLLSAGSLFGKVRQLWKRRRDLDRRRTASTRTLSGGLVERLEDRSMMAIDVGNQ
LPVPDLDNSVSYYADYSMVGSNVAGGDSAEGEAGSDAAEGEPANNLVQFAKNLAAAGVKF
YGAAWNADTTAQRNLFGDGGQFLPFIEVTNNDRSVNSVATTNNITVYPTWVFPDNSRLEG
IASLETLATRSGVAIPQSENPTFANIGTQNLLGGSPLWVGIDGYDPNGGALTYTVTSDNP
LVTASISPSTNRSVAMNVQGFGTMVFQLFDHLAPRATNRIAELANAGFYNDTATNTVGFH
RITRQSSLTVIQGGDPLGNGTGGSNLPDFDDQFNFDLQHNSAGLLSMAKSSDDTNNSQFF
VLGASARHLDFNHTVFGMLTEGDAVRAAINAAATNTSDAPLVPIIFDTVQIINDTENAVL
NLKAAEGATGSANVTVTVTDAQGNSYQQTFAVNVTPDTINGGPFLSEIDTVRTTTGTNAT
LQLVGNDVEGNALYFDAVKPSDETVNYTVTVNNDTGLVTITPPSGFVGSFEVLVGVRAAA
GSNTSDAFDTQRVTVEVAPVAPALPDLADASDSGVSNTDNITNTASHTFTIGGVTSGAVV
KLYRGSTLLGQATASGTSVQITTTNLASFADGVQSITATQTVGGVESVASAVLSVTLDRL
APVALTSTAPTAAEVGINLNYNAQHPDESTTGFRYSLTTPPTGATIDAVTGVVSWVPTAD
QVGTRSFGVVATDAAGNIRTQSVTVSVTQPVVQLVDVILRVVDANGNEITSIANGGTFFL
QMVVKDLRPGGSDAGVFSAYADVVWNAAKANATGSLVYGSSYTSARSGVVSAGLIDEVGG
TASLSPLGPGEFELFKIQMQATQSGTITFSSNPADNNSARPVLLYNLSDDQLTDQTRYGS
VSLNVDLPFDAVNDTFNVNEDSNNFTLNPLQNDTIVSGSGSVLTIDSVGTTSSGGTVTVA
GNGLSLLYTPAANFVGTETFTYTVKNQNGDTDTATITVQVANVNDPPVATNDTFTVAENS
ANTTLDVLGNDLQTPDTGETLRVQSVSAGSNGGTLSIGGSGSHVVYRPANGYIGTETFTY
VVSDGNGGTATGTVTVNVTNANDNPVAVTDQVTVAEDSDITLINVLANDTTGNDTGETLT
VTAVGVGSKGGTITIVSGGTGVNYKPAANFQGSETFTYTISDGNGGVASGTVIVTVTNSN
DNPTAVADAVQGFKNTTSEFNPLANDTSAPDPTETLTITTVTQGTAGGTVAITQNGTRVN
YTPASNFSGTDTFTYTISDGNGGTATQTVTVNVLEFIPSQLRGYVYFDSNNTGVREEGES
PISGITITLTGTATGGTAVNRTTTTSTTGFYEFTNLAPGTYTITQTQPAFLLDGREQIGS
QGGTSTVNDKIVINLAQNTNGQNNNFGELGLQVQHRTINDLFGSSFRTNAVASVSTTAGS
SFFAPRGTAWAGYTNGTAELVNNSTQLRLTITNPAGQRVQTTLAITDKRLTLLASQTGGK
LFRINALPTSLGFTVVTTSTANTSGGEGEPAEGEYTPNASAMAVPSMDDAEGEPTSSDDD
ALVQATSVVEEEGNLADDSLIYATSGAPESSSTLSAIGEFNTPIVSALDVGEGEPAAIVS
AASRSISSQPSSTTLASLNPLLTIEVGYSASLEPSAAPLRGSILEDLLDNDDDSASGSSA
GSLPGASVEESSKLIDEAFYESEKDELDWSLDLWEEELASDDDYEAALAIVLLELAQELA
AI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgatgatccaccgactactctccgccggaagtctgtttggaaaagtacgccag
ctctggaagcgtcgccgcgacttggatcgtcggcggaccgcttcgactcgtaccctttcc
ggtggtctggtcgaacggcttgaagaccgctcgatgatggcgattgacgtcgggaaccaa
ttgccggttcctgatctcgacaacagcgtgtcgtactacgccgactattcgatggtgggg
agcaatgtcgccgggggagattcggctgaaggagaagctggttccgacgccgctgaaggt
gagcccgccaataaccttgtgcagtttgccaaaaatctcgccgctgctggcgtgaagttc
tacggcgctgcctggaatgccgacaccacagctcagcgcaacttgtttggcgatggtggc
cagttcttgcccttcatcgaagtgacgaacaacgatcgcagcgtcaactccgttgcgacc
accaataacatcaccgtctatccaacgtgggtatttccagacaactcgcgtctcgaaggg
attgcttcgctcgaaacgctcgccacacgcagcggtgttgcgattccacaatccgagaat
ccgacgttcgccaacatcggcacacagaacctgctcggtggctcacccctatgggttggc
atcgatggctatgatcccaacggcggcgcactcacctacaccgtcacgagcgacaaccct
ctcgtcaccgcttcgatcagccccagcaccaatcgcagcgtagcgatgaacgtgcaaggc
ttcggcacgatggttttccagctgttcgatcaccttgccccacgtgccacgaatcgcatc
gctgaactcgcgaatgccggattctacaacgacaccgccaccaacacggtcggtttccac
cgcatcacccgtcagtcgtccctcaccgtcatccaaggtggtgatcccctcggcaacggc
accggtggttcgaacctgcccgacttcgacgatcaattcaacttcgatttgcagcacaac
tcggctggcctgctctcgatggccaagagctccgacgacaccaacaactcacagttcttt
gtgctcggcgcatcggctcgccacctcgactttaatcacaccgtcttcggcatgctgacc
gaaggggacgccgttcgcgctgccatcaacgccgcagccaccaacaccagcgacgcccca
ctcgttcccatcattttcgacaccgtccagatcattaacgacacggaaaacgccgtcctc
aacctgaaggctgctgaaggtgcgacagggagtgccaacgtcaccgtcacggtcaccgat
gcccagggcaattcgtaccagcaaacctttgcggtgaatgtcacccccgacaccatcaat
ggcggtccgttcctgtcggaaatcgataccgttcgcaccaccaccggcaccaacgcgaca
ttgcaactcgtcggcaacgatgtggaagggaacgccctctacttcgacgccgtgaagcct
tccgacgagacggtcaactacacggtgaccgtcaacaacgacaccggcttggtcaccatt
actcccccctccggttttgtggggagctttgaagtgctggtgggtgtccgcgccgctgcg
ggctcgaataccagcgacgctttcgacacgcagcgtgtgacggtggaagtggctcccgtc
gctccggcacttcccgaccttgcggatgcttccgatagcggcgtttccaacaccgacaac
atcacgaacaccgcttcgcacacgttcaccatcggaggcgtcaccagtggtgccgtcgtc
aagctctatcgcggcagcaccttgctcggccaagccacggccagcggcaccagcgtacaa
atcaccacgacaaacctcgcctcgtttgccgatggagtgcaatcgatcaccgccacgcaa
accgtcggcggtgtcgagagcgtagcatccgctgtgctgagcgtgacgctcgatcgcttg
gctcctgtggccctgacgtcgaccgctcccaccgctgcggaagtcggaatcaatctgaac
tacaacgctcagcatcccgatgaatcgacaacgggctttcgctattcgctcacgactcct
cccaccggcgccaccatcgatgccgtgaccggcgttgtctcgtgggtccccaccgccgac
caagtcggcacgcgtagtttcggcgttgttgccaccgatgctgccggtaacattcggaca
cagtcggtcaccgtcagtgtcacgcagcctgtcgtgcagttggtcgatgtgatcttgcga
gtggtcgacgccaacggcaatgagatcaccagcatcgccaacggtggcacgttcttcttg
cagatggtggtcaaggatttgcggccaggtggtagcgatgctggcgtcttctcggcctat
gccgatgtggtgtggaatgccgcgaaggctaacgccacaggctcgctcgtctatggatcg
tcgtatacctcggctcgcagcggcgtggtttccgctggcttgatcgacgaagttggcggc
actgcaagtctctcccctctggggccaggcgagttcgagctcttcaaaatccagatgcag
gccactcagtccggcactattacgttcagctcaaacccagcggacaataactcggcccga
cctgtgttgctctacaacttgtccgacgatcaattgaccgatcagacccgctatggctcg
gtttcgctgaatgtcgatctgccgtttgatgcggttaacgacacgttcaatgtcaacgaa
gactcgaacaacttcacgcttaatcccctgcaaaacgacacgattgtgtcgggcagcggc
agcgtgctgacgatcgattcggtcggcaccacctccagtggcggcaccgtgacggtggcg
ggtaacggactctcgctcctctatacacctgctgcgaatttcgtcggcactgagaccttc
acctacaccgtgaagaatcaaaatggcgacaccgacactgcgaccatcacggtgcaggtg
gccaatgtcaacgatccaccggtcgcgacgaacgataccttcacggtcgctgaaaactcg
gcaaacaccacactcgatgttctcggcaacgatctgcaaacccccgataccggcgaaact
cttcgcgtgcagagtgtgtcggctggttccaacggcggcacattgtcgatcggcggttca
ggttcgcacgtggtctatcgtcctgccaacggctacatcggtaccgagaccttcacctac
gtggtgagcgacggtaatggtggaacggccacagggaccgtgacggtgaacgtcaccaat
gccaacgacaatcctgttgctgtgaccgatcaagtgaccgtggccgaagatagcgacatc
acgctcatcaacgtgctggccaacgataccaccggcaacgacaccggcgaaacgctcact
gtcactgcggttggagtcggttcgaaaggtggcaccatcaccatcgtctcgggtggtacc
ggtgtgaactacaaaccggctgccaacttccaaggttcggaaacgttcacctacaccatc
agcgacggcaatggcggcgtggcttcgggaacggtgatcgtcaccgtcacgaactcgaac
gataaccccaccgctgtggccgatgcagtgcaaggtttcaagaacaccaccagcgagttc
aacccgctggccaacgatacttcggcacccgatcctacggaaaccctcacgatcaccacc
gtgacgcaagggaccgctggcggtacggtcgcgatcacgcaaaacggcacacgggtgaac
tacactcctgcgtcgaacttcagtggcaccgacaccttcacctacaccatcagcgatggc
aacggtggtacggcaacgcaaacagtcacggtcaatgtcctcgagttcatcccgagccag
ttgcgtggctatgtctacttcgattcgaacaacactggtgttcgcgaagaaggtgaatcg
ccaatctcgggcattacgatcaccctgacaggaacggccactggtggcaccgctgtcaac
cgcaccacaacgacctcgacgaccggtttctatgagttcacgaacctggcaccaggcacc
tacaccatcacccaaacgcagcctgcgtttttgctcgatggtcgtgagcagatcggatcg
caaggtggaacgagcacggtcaacgacaaaatcgtgatcaacctggctcagaacacgaat
ggtcagaacaacaacttcggcgaactcggtctgcaggttcagcatcgcacgatcaacgac
ctgtttggttcgagcttccgcaccaatgcagtcgcttcggtcagcacgaccgctggcagc
agcttctttgctcctcgcggaaccgcttgggcaggctataccaacggaacggctgaactt
gtcaacaacagcacgcagctgcgactgacgatcactaatccagctggtcagcgggtgcaa
accacactggcaatcaccgacaagcggctgaccctcctcgcctcgcaaaccggcggcaag
ctgttccgcatcaatgcgttgcccacctcgctcggcttcacggtggtcaccaccagcaca
gctaacaccagcggcggtgaaggtgaaccagcagaaggggaatacacgccaaatgcatcg
gcgatggcagtcccctcgatggatgatgccgaaggggagccgacttcgagcgacgacgat
gctttggtgcaagccacttcggtggtcgaggaagaagggaacctcgctgatgactcgctc
atctatgctacgagcggggcccccgagagcagcagcacactctcggccattggggagttc
aacacgcctatcgtgtcggccctcgatgtaggcgaaggagaacccgccgcgattgtgagt
gcagcttcgcggagcatcagcagccagccgagcagcacgactctcgcaagtctcaatcca
ctgctgacaatcgaagtgggctacagtgcctcgctcgaaccatcggccgcgccactgcgg
ggctcgatcctcgaagatttgctcgacaatgacgacgatagtgcaagcggctcatcggcc
ggttcactgccgggtgcttcggtcgaagaatcgtcgaagttgatcgacgaggcattctac
gaaagtgaaaaggacgagctcgattggtcgctcgacctgtgggaggaagaactcgctagt
gacgatgattacgaggcggctctcgccatcgtgttgctcgaactagctcaagaactcgcg
gcgatctaa
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integrated database retrieval system
