Pirellula staleyi: Psta_1972
Help
Entry
Psta_1972 CDS
T01147
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psl
Pirellula staleyi
Pathway
psl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Psta_1972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psl03400
]
Psta_1972
Enzymes [BR:
psl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Psta_1972
DNA repair and recombination proteins [BR:
psl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Psta_1972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADB16646
UniProt:
D2R0P8
LinkDB
All DBs
Position
complement(2541746..2542624)
Genome browser
AA seq
292 aa
AA seq
DB search
MDELVTRKLLLQSLESLARAGVDQLQRGVPLGVLPAPAATAARPDSPAASMPLPSPPAAT
ADRPMPTRLAAPTPPPFEPRLAVPATSDLEPVMAKKSAAKSAACASLDDLKAEVAGCKLC
KELARTRKQTVFGIGNPQPRVVIFGEAPGADEDRTGEPFVGRAGQLLTKIIEACGWKREE
VYILNVLKCRPPDNRTPVEEEIENCRPFFERQIELLAPEYIVCVGTVPSQALLRTKEPVG
RLRGRFHEYNGRSVLVTYHPSYLLRNPSAKKFVWDDMQMLLKKMGIEPPKSK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacttgttacgcgaaaactgctgctccaatcgctcgagtcgctcgctcgggca
ggggtggatcaattgcagcgtggcgttccgttgggggttctgccggcgccggcggcaact
gctgctcggcccgattcgcctgccgcgagcatgccactgccaagcccacctgctgccaca
gccgaccggccgatgccgacgcgattggccgcacctactccgccccctttcgaaccgcgt
ttggcggtccctgcaaccagcgatttggaacctgtgatggccaaaaaatcggcggcaaag
tcggctgcctgtgcgagtctcgacgatctgaaggcggaagtggcagggtgtaagctctgc
aaagaactggcccgcacgcgcaagcaaactgtgtttgggatcggcaatcctcagccccgc
gtcgtgatttttggcgaagctccaggtgccgatgaggatcgaacgggcgagccatttgtc
gggcgagctggtcagctgctcacgaagatcatcgaagcttgcggctggaagcgcgaagag
gtgtatatcctgaacgtgctgaagtgccgtccccctgataaccggacaccggtggaagaa
gagattgaaaactgccgccccttcttcgagcggcaaatcgagctgcttgcgccggagtat
atcgtctgcgtggggacggttccgagccaagcgctcctgcggacgaaagagccggtcgga
cgtttgcgcggaaggttccacgagtacaacgggcgctcggtgctggtgacctatcacccg
tcgtatttgctccgtaatccgtcggccaagaagttcgtgtgggacgacatgcaaatgctg
ctgaagaagatgggaatcgagccacccaagagcaagtag
DBGET
integrated database retrieval system
