Pirellula staleyi: Psta_2157
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Entry
Psta_2157 CDS
T01147
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psl
Pirellula staleyi
Pathway
psl03410
Base excision repair
psl03430
Mismatch repair
psl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Psta_2157
03430 Mismatch repair
Psta_2157
03440 Homologous recombination
Psta_2157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psl03400
]
Psta_2157
DNA repair and recombination proteins [BR:
psl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Psta_2157
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Psta_2157
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Psta_2157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADB16830
UniProt:
D2R2J0
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All DBs
Position
complement(2782177..2783949)
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AA seq
590 aa
AA seq
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MRRWRIHAHDADRIAYLERTTGLSPIIVQLLVARGIYQPDAAKEFLDAKFGGLRDPELLP
GATEAAERLFAAIEAQRKIVVYGDYDADGMTGTSILLGCLKLLRADASYYVPNRLEEGYG
LSNTALESLAAKGAQLVISVDCGIASLSEARRAKELGLELIVTDHHEFASELPEAAVCVH
PRLPGTAYPFGGLCGAGVALKVAWALCQKASQSKKVTDAMRTYLLSAMGLAAIGTVADVV
PLVDENRILVRHGLTYLKSQPMIGLGALLELTGLTKKQSLSSEDIAFTIAPRLNAAGRFG
QAQLAVELLTTDNASRAASLAEYIHQLNSSRESLERSIQLAAVKQAKEQFNPDDDPALVL
AGRGWHAGVIGLVAGRLAEKFNRPVVLIALDQLGLKPGTGSARSVAGFNLHEALTASGEH
LVGYGGHAAAAGLRIEESKVEAFREAFCEFAASQIRPSERTGELRIDAESQLCEVNVSTI
RQIEQMEPFGCGNPRPLLCASGVTLVEPPKRIGGGERHIAIKLQQAGVTMRGVGFGMGDQ
CDELAQAVGPLDIAYRPVINEFRGRVTAELQLVDWRPTLSASKLPEAAAS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgctggcggattcacgcgcacgatgctgaccggatcgcttacctcgagcgcacc
actggcctctcgcccattattgttcagctgctcgttgctcgtggaatctatcagcccgac
gcggccaaagagtttctcgacgccaagttcggcggccttcgcgacccagaattacttccc
ggcgcgaccgaagcagccgagcggctgtttgccgccatcgaggcccagagaaaaatcgtc
gtctatggcgactacgatgccgacggaatgaccggcacatcgattttgctgggctgtttg
aagctgctgcgcgccgatgcttcgtactacgttccgaaccgtctcgaggaaggttacgga
ctcagcaacacagccctcgagtcgctcgctgccaagggagcccaactcgtcatatcggtc
gactgcggcattgccagtctcagcgaagcccgccgggccaaggaactgggactcgaattg
atcgtcaccgatcatcacgaatttgcgagcgaattgccggaagcagcggtttgtgtgcat
ccacgactgccgggaacagcctatccgtttggcggactctgtggcgctggagtggctctg
aaagttgcctgggcgctttgccagaaggcgagccagtcgaagaaggtgaccgatgccatg
cgcacctatttgctgagtgccatgggactagcggccatcggcactgtggccgatgtggtc
cccctggtcgacgagaatcgcatcttggtgcgtcacggactgacctacctgaaatcgcaa
ccaatgataggactcggagcacttctcgagctcaccggacttacgaaaaaacagtcgctc
tcaagcgaagatatcgcctttacaatcgcgccgcgactgaacgcagcaggacgtttcgga
caagcgcagctggccgtggaactgctcaccaccgacaatgcctcgcgcgcagcttcgctc
gccgaatatatccaccaactcaacagcagccgcgaaagcctggaacggagcattcagctc
gcagcggtcaagcaagccaaagaacagttcaatcccgacgacgatcccgcgcttgtcttg
gctggtcgtggctggcacgctggtgtcatcggtctcgttgctggtcgactcgccgagaag
ttcaatcgtccggttgttctgattgcgctcgatcaacttgggctcaagccaggaactggc
agtgctcgcagcgtggctggtttcaacctccacgaagcactcaccgcgtccggcgagcat
ctcgtgggctacggtggacacgctgcagcagcaggacttcgcatcgaagaatccaaagtc
gaggccttccgcgaagcgttctgcgaattcgccgcctcgcagattcgcccgagcgaacga
acgggagaactccgtatcgatgccgaaagtcagctgtgcgaagtcaacgtcagcacgatt
cgtcagatcgaacagatggaaccatttgggtgtggcaatccgcgtcccctgctctgtgcc
agcggtgtcactttggtcgaaccacctaaacgcatcgggggaggcgaacggcacattgcg
atcaagttgcagcaagctggcgttacgatgcgaggtgttggttttggcatgggggatcag
tgcgacgaactcgcacaagcagttggcccgcttgatatcgcctaccgccccgtcatcaac
gagtttcggggacgcgtgaccgccgaactgcaactcgtcgactggcgtcctaccctctcg
gccagcaaactccccgaagcagctgccagctaa
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