KEGG   Pirellula staleyi: Psta_2157
Entry
Psta_2157         CDS       T01147                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psl  Pirellula staleyi
Pathway
psl03410  Base excision repair
psl03430  Mismatch repair
psl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Psta_2157
   03430 Mismatch repair
    Psta_2157
   03440 Homologous recombination
    Psta_2157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psl03400]
    Psta_2157
DNA repair and recombination proteins [BR:psl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Psta_2157
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Psta_2157
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Psta_2157
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: ADB16830
UniProt: D2R2J0
LinkDB
Position
complement(2782177..2783949)
AA seq 590 aa
MRRWRIHAHDADRIAYLERTTGLSPIIVQLLVARGIYQPDAAKEFLDAKFGGLRDPELLP
GATEAAERLFAAIEAQRKIVVYGDYDADGMTGTSILLGCLKLLRADASYYVPNRLEEGYG
LSNTALESLAAKGAQLVISVDCGIASLSEARRAKELGLELIVTDHHEFASELPEAAVCVH
PRLPGTAYPFGGLCGAGVALKVAWALCQKASQSKKVTDAMRTYLLSAMGLAAIGTVADVV
PLVDENRILVRHGLTYLKSQPMIGLGALLELTGLTKKQSLSSEDIAFTIAPRLNAAGRFG
QAQLAVELLTTDNASRAASLAEYIHQLNSSRESLERSIQLAAVKQAKEQFNPDDDPALVL
AGRGWHAGVIGLVAGRLAEKFNRPVVLIALDQLGLKPGTGSARSVAGFNLHEALTASGEH
LVGYGGHAAAAGLRIEESKVEAFREAFCEFAASQIRPSERTGELRIDAESQLCEVNVSTI
RQIEQMEPFGCGNPRPLLCASGVTLVEPPKRIGGGERHIAIKLQQAGVTMRGVGFGMGDQ
CDELAQAVGPLDIAYRPVINEFRGRVTAELQLVDWRPTLSASKLPEAAAS
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgcgccgctggcggattcacgcgcacgatgctgaccggatcgcttacctcgagcgcacc
actggcctctcgcccattattgttcagctgctcgttgctcgtggaatctatcagcccgac
gcggccaaagagtttctcgacgccaagttcggcggccttcgcgacccagaattacttccc
ggcgcgaccgaagcagccgagcggctgtttgccgccatcgaggcccagagaaaaatcgtc
gtctatggcgactacgatgccgacggaatgaccggcacatcgattttgctgggctgtttg
aagctgctgcgcgccgatgcttcgtactacgttccgaaccgtctcgaggaaggttacgga
ctcagcaacacagccctcgagtcgctcgctgccaagggagcccaactcgtcatatcggtc
gactgcggcattgccagtctcagcgaagcccgccgggccaaggaactgggactcgaattg
atcgtcaccgatcatcacgaatttgcgagcgaattgccggaagcagcggtttgtgtgcat
ccacgactgccgggaacagcctatccgtttggcggactctgtggcgctggagtggctctg
aaagttgcctgggcgctttgccagaaggcgagccagtcgaagaaggtgaccgatgccatg
cgcacctatttgctgagtgccatgggactagcggccatcggcactgtggccgatgtggtc
cccctggtcgacgagaatcgcatcttggtgcgtcacggactgacctacctgaaatcgcaa
ccaatgataggactcggagcacttctcgagctcaccggacttacgaaaaaacagtcgctc
tcaagcgaagatatcgcctttacaatcgcgccgcgactgaacgcagcaggacgtttcgga
caagcgcagctggccgtggaactgctcaccaccgacaatgcctcgcgcgcagcttcgctc
gccgaatatatccaccaactcaacagcagccgcgaaagcctggaacggagcattcagctc
gcagcggtcaagcaagccaaagaacagttcaatcccgacgacgatcccgcgcttgtcttg
gctggtcgtggctggcacgctggtgtcatcggtctcgttgctggtcgactcgccgagaag
ttcaatcgtccggttgttctgattgcgctcgatcaacttgggctcaagccaggaactggc
agtgctcgcagcgtggctggtttcaacctccacgaagcactcaccgcgtccggcgagcat
ctcgtgggctacggtggacacgctgcagcagcaggacttcgcatcgaagaatccaaagtc
gaggccttccgcgaagcgttctgcgaattcgccgcctcgcagattcgcccgagcgaacga
acgggagaactccgtatcgatgccgaaagtcagctgtgcgaagtcaacgtcagcacgatt
cgtcagatcgaacagatggaaccatttgggtgtggcaatccgcgtcccctgctctgtgcc
agcggtgtcactttggtcgaaccacctaaacgcatcgggggaggcgaacggcacattgcg
atcaagttgcagcaagctggcgttacgatgcgaggtgttggttttggcatgggggatcag
tgcgacgaactcgcacaagcagttggcccgcttgatatcgcctaccgccccgtcatcaac
gagtttcggggacgcgtgaccgccgaactgcaactcgtcgactggcgtcctaccctctcg
gccagcaaactccccgaagcagctgccagctaa

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