Pirellula staleyi: Psta_2313
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Entry
Psta_2313 CDS
T01147
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psl
Pirellula staleyi
Pathway
psl03030
DNA replication
psl03430
Mismatch repair
psl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psta_2313
03430 Mismatch repair
Psta_2313
03440 Homologous recombination
Psta_2313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psl03032
]
Psta_2313
03400 DNA repair and recombination proteins [BR:
psl03400
]
Psta_2313
Enzymes [BR:
psl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psta_2313
DNA replication proteins [BR:
psl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Psta_2313
DNA repair and recombination proteins [BR:
psl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Psta_2313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
PHP_C
DUF6282
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ADB16983
UniProt:
D2R3M9
LinkDB
All DBs
Position
complement(3013651..3017229)
Genome browser
AA seq
1192 aa
AA seq
DB search
MSDRKFVHLHCHSHYSLLDGASSVPKLLKRAKEHGMSALALTDHGNLHGALEFYNKAKAL
GINPIIGYEAYIAPGSRFEKKDAANSKEASYHLTLLAQNRQGFKNLIKLASAASLEGFYY
KPRIDKEILQAHSEGIICLSGCVSSEFSNAVLRGHGGDKELKDAQEIAGWFHKVFGDRYF
LEIMNNGIDIQRFQLEGAVDVAKKMGLPLVATSDAHYAYAEDAEAQDVLLCVNTGKFRTD
TNRMKMENGSFYLRSAEEMYEHFHGLEDAVARSQEIADSVHIDLELGKRHFPVYPIPPEK
TAEDYLRELCVQGLKERYAGDEEMLPGGELSEVVVARLERELNVINKLGFPNYFLIVWDF
VRHAREQDVPATARGSGVGALVCFALYLSHVCPIKYDLLFERFLDLNRKEAPDIDIDFCK
DRRGDIIRYVKDKYGESNVAQIGTFGTLAARAAIKDVGRVLGIPMERVNKVTAMVPDELH
IHLSDALEKSDELKAVYNGDPDVREMLDLAMRIEGLARNVGTHAAAVVIADKPLTEYVPL
GRVGGKSDIITQWSMGDVEAAGLLKMDFLGLRNLTILSKAVEIIQQTTGKRVDPYKFPLD
DKRTFALLQRGETKGIFQLESGGIRDLLQKMKPDHFRDIIATNALYRPGPLEGGMVADYV
AVKHGRKQAEYIHPVCEKILSETNGVMVYQEQVMRILNELGGIELAASYTVIKAISKKKE
DLINKNKVQFLKGAVEKGITEKQADDFWNLIIKFAGYGFNKSHSTAYALIAYMTAYLKAH
YPVEFMAALLSGDIQGRNFKTKDSLVEHLEDCTRMGITVQPPNVNESNVDFAVKDGKILF
GLSAIKGCGGSAGESIVAARTKGGPFRDLFDFCERVDATGSSKGTIETLIKAGAFDCFGA
RRSQQFAIVERAIQSGQSVAADRKSGQKNLFGAFEEEEPSKAKSTTLPDVPELASKEMAT
QEKEVLGFYLSSHPLDEHKRTLATYRSHTTADIGPIPDRSEVILGGMVSAIKLSNTKNPK
PGAPSRYVMFDLEDTEGTIRCILWPDGYAEMGQMVQPDAILMVRGAIDRRGGEEANLVIN
ELMPLDQLSTRYTSGLVVRVDTRDQPDDCLLKIREITRGYPGDKELQLVLVLDDASRVHM
RAHKMKIDVTPELRTRLDDLLGPGNFQLLTTPPKPSADRPGPRRQYPRSPNS
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcgcaagttcgttcacctgcactgccactcgcactacagcctgctcgatggg
gcatcgtcggtccccaaactcctgaagcgcgcgaaagaacatggcatgagcgcgctggcg
ctcaccgatcacggcaacctgcacggcgcactcgaattctataacaaagccaaagcgctc
ggcatcaatccgatcatcggctacgaagcctacatcgcacccggcagccgcttcgaaaag
aaagatgccgccaacagcaaagaagcaagctaccacctcacgctgctggcacaaaatcgc
caaggcttcaagaacctgattaagctcgcatcagccgcctcgctcgaaggtttttattac
aaaccgcgcatcgacaaagaaattcttcaagcgcacagcgaaggaatcatttgcctctcg
ggctgcgtgtcgagcgaattttctaacgccgtgctgcgtggtcatggtggcgacaaagaa
ctcaaagacgcgcaggaaattgccggctggttccacaaagtttttggcgaccgctatttc
ctcgagatcatgaacaacggaatcgacatccagcgattccaactcgaaggggcggtcgat
gtcgcaaagaaaatggggctgccactcgtagccaccagcgacgcgcactatgcctatgcc
gaagatgctgaagcgcaagacgtgctgctgtgcgtgaacactggtaagttccgcaccgac
accaatcgaatgaagatggaaaacggctcgttctatctccgctcggcggaagaaatgtac
gagcattttcacggactcgaagatgctgtcgcgcgcagtcaagagatcgccgacagcgtg
catatcgatctcgaactcggcaagcgtcactttccggtctaccccattccacccgagaaa
actgcggaagattatctccgcgaactctgcgtacaagggcttaaagaacgttacgccggc
gacgaggaaatgctcccgggtggcgagctttcggaagttgttgtcgcgcgtctcgaacgc
gaactaaacgtcatcaacaagctcggatttcccaactacttcctcatcgtgtgggacttc
gtgcgtcacgcgcgcgagcaagatgttccagcgacggcgcgtggcagcggcgtcggcgca
ctcgtctgctttgcgctttatctcagccacgtttgtccgatcaaatacgatctgctgttc
gagcgattcctcgatctcaatcgtaaagaagcgcccgatatcgatatcgacttctgcaaa
gatcgacgtggcgacatcattcgctacgtgaaagacaagtacggcgaatcgaacgtcgcg
cagatcggtacgttcggaaccctcgccgcccgcgcggccattaaagacgtcggccgtgtg
ctcggcattccgatggagcgcgtgaataaagtcaccgcgatggtccccgatgaactccat
atccatctgagcgatgcgctcgaaaagagcgacgagctgaaagctgtttacaacggcgat
cccgacgttcgcgaaatgctcgacctggcgatgcgcatcgaagggctcgcgcggaacgtc
ggcacccatgctgctgcggtggtgatcgccgacaaaccgctcaccgagtatgtgccgctc
ggacgagtcggcggcaaaagcgacatcatcacccagtggtcgatgggcgacgtcgaagcg
gctggcttgttgaagatggacttcctcggcctgcgaaacttgacgatcctcagcaaagcg
gtcgaaatcattcagcaaacgaccggtaaacgggtcgatccgtacaagtttccgctcgac
gacaaacgaacctttgcgctgctgcagcgcggcgaaaccaagggcatttttcagctcgaa
agtggtggcattcgcgatcttctgcagaagatgaagcccgaccatttccgcgacatcatc
gccaccaacgccctctatcgccccggtccgctcgaaggtggtatggtcgccgactacgtc
gcggtgaagcatggtcgcaagcaagcggagtacatccatcccgtttgcgaaaagatcctc
tccgagaccaacggcgtgatggtctaccaagagcaggtgatgcgaattctgaacgaactc
ggcggaatcgagctcgctgcttcgtacaccgtgattaaggcgatcagcaaaaagaaagaa
gacctgatcaacaagaacaaagtgcagttcttgaaaggggcggttgaaaaagggatcacc
gaaaaacaggccgacgacttctggaacctgattatcaagttcgctggctacggctttaac
aagagtcactcgaccgcctacgcgctcatcgcttacatgacggcgtatctcaaagcgcac
tatccggtcgagttcatggccgcactactctcgggcgatatccaggggcgtaacttcaaa
accaaagactccctcgtcgagcatttggaagactgcacgcgcatgggaatcaccgtgcag
ccccccaatgtgaacgaaagcaacgtcgatttcgccgtgaaagatggaaagattctgttc
ggactttccgcaatcaaaggttgcggtgggtcggctggcgagtcgattgtcgccgcgcgc
accaaggggggaccgtttcgcgatctgttcgatttctgtgagcgtgtcgacgccaccggc
tcgagcaagggaacgatcgaaaccctcattaaagcgggggctttcgactgttttggtgct
cgccgctcgcagcagtttgcgattgtcgagcgcgcgatccagtcggggcaatccgtcgca
gccgaccgtaaaagtggccagaaaaacttgttcggcgcgttcgaagaagaggagccctcg
aaggccaaatcgaccacccttcccgatgttccagaactcgccagcaaggaaatggcgacg
caagagaaagaagtgctcggcttctatctttcgagccatccgctcgacgaacacaaacga
acgctggccacgtaccgcagtcacacaacagccgacatcggcccgattcccgatcgctcg
gaagtgatcctcggcggcatggtctcggccatcaagctctcgaatacgaagaaccccaaa
cctggtgcgccatcgcgttatgtgatgttcgacctcgaagataccgaaggcacgatccgc
tgcatcttgtggcccgatggctatgccgaaatgggacagatggttcagcccgacgccatc
ctgatggtgcgtggtgcgatcgataggcgtggtggcgaagaagccaacctcgtcatcaac
gaactgatgccgctcgatcagctcagcacgcgttacacctcgggcctcgtggtgcgtgtc
gacacgcgcgatcagcccgacgactgcctgctgaagattcgcgaaatcacgcgcggctat
ccgggggataaggaactgcaactcgtcctggtgctcgacgacgccagccgcgtccatatg
cgggcgcataagatgaaaatcgatgtaaccccagaactccgcacacgcctcgacgatttg
ctggggccaggaaatttccagctcctgaccactccgcccaaaccgtctgccgatcgtcct
ggtcctcgtcgtcagtatccgcgatcgccgaattcataa
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