Pirellula staleyi: Psta_2550
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Entry
Psta_2550 CDS
T01147
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psl
Pirellula staleyi
Pathway
psl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Psta_2550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psl03021
]
Psta_2550
03400 DNA repair and recombination proteins [BR:
psl03400
]
Psta_2550
Enzymes [BR:
psl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Psta_2550
Transcription machinery [BR:
psl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Psta_2550
DNA repair and recombination proteins [BR:
psl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Psta_2550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Biotin_lipoyl_2
Peptidase_M23
SHOCT
Cir_Bir_Yir
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
ADB17219
UniProt:
D2R5N7
LinkDB
All DBs
Position
complement(3312287..3316630)
Genome browser
AA seq
1447 aa
AA seq
DB search
MTIGESSYDRINDYASVKISLARPHDIRSWSFGEVKKPETINYRTYRPEKDGLFCERIFG
PEKDWECACGKYRGMKYKGMICDRCGVKVTHSRVRRKRMGHIELAAPVVHIWFFKAMPSR
LGNLLDMKTTSLEKVIYFQDYVVTDPKGTDLERQQLLTEEEFRAAREQWGDGAFDADMGA
EAVRKLLSALDLVKLSEELREELTTTNSKQKKKDLINRLKIVESIRDSDNRPEWMVLDVV
PVIPPDLRPLVLLDSGNFATSDLNDLYRRIINRNNRLRKLVDLNAPEVIIRNEKRMLQQS
VDALFDNNRCKRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVDYSARSVIVVGPRLK
LHQCGLPKKIALELYQPFIIRKLKELGHADTIKSAKKMLERKDEEVWDILESAIQNHPVM
LNRAPTLHRMGIMAFEPVLVEGNAIHLHPLSCKGFNADFDGDQMAVHLPLSIEAQVEAHT
LLLSTNNVFAPSNGKPIMSPSQDTVMGCNYITLELPGRKGEGMIFSTPAEAQLAFSHGKI
EMQAKIKVRLPKNQKLKSDGDEKHKPGAIVQTTYGRILFNSMLPRGMDFYNKGMKSGDLA
NCISDCYQLLGRKATINLLDDMMQLGFREAFLSGLSFATDDLITPDTKIKHIAEAEKTVM
KYKKLYERGVITEKERYNQVLDTWTHAREAITGEMREAMRTDDRGGNGYVNPVYLMADSG
ARGGIEQIRQLAGMRGLMAKPTGEIIETPIKSNFREGLTVLEYFSSTHGARKGLADTALK
TADSGYLTRKLADVAQNVVVTLHDCGTTQGITKGVIYRGEKVEVKLSAAIIGRVSRQSIV
NPITDEVIVRENDLVTPEIARRIEDLGLERIQVRSSMTCEAPLGVCRLCYGMDLSTGSLV
EEGMAVGIIGAQSIGEPGTQLTMRTFHIGGTVNTSVEESETKAKKEGIVKFTRMRFVANE
EGNNIVLTRNGEILLLDPRGRELEKYDVPNGAILRVKENDVVKPGQVLCEWDPHSIPILS
EVAGKVRYEDVVEGETLRIEKDSGGNARRLIMDHKGELHPQIVLEDSEGKPLDVYYLPER
AHVVVEEGKVISAGSVLAKTPREAAGITDITGGLPRVTEIFEARKPKDPAVMAEVDGVVE
ILQEKRRGKRTIVVRSESGIEREHLVPHGKRFLVHSGDHVKAGQALVDGPLVPHDILRIS
GEEALQQYLVHEVQNVYRSQRVDINDKHIEIIIARMLRKVRIESAGDTNLLPGLVMDRFD
FRAVNTNLSKCLKITHKGDSDFAVDSIVPKEALEQVNAQIEALGGDAARGSKPKSATAST
QLLGITKAAVQSSSFISAASFQETTKVLTEAALAGKVDHLVGLKENVILGHLIPAGTGFR
NFQESEVRYRPEALQAMAEQKDKVLETAFPLLAGSDAPSENSPPAPSSSGKPAPSLESLL
GGSAASE
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcggcgaatcctcttacgaccgcattaacgactacgcttcggtaaagatcagc
ctcgcgcgtcctcacgacatccgcagctggtcctttggcgaagtgaagaaaccagaaacg
atcaactaccgcacatatcgtccggaaaaagacggcctgttttgcgaacgcatctttggc
cccgaaaaagactgggaatgtgcttgcggtaagtatcgcggcatgaagtacaaggggatg
atttgcgatcgctgcggtgtgaaagtcacccacagccgcgtgcgccgcaagcgcatgggg
cacatcgaactggctgcacctgtggtgcacatctggttcttcaaggcaatgccgagccgc
ctcggcaacttgctcgacatgaagaccaccagtctcgagaaggtgatctacttccaagac
tacgtggtgaccgatccgaagggaacggacctcgaacgccagcagttgctgaccgaagaa
gagttccgcgccgctcgcgaacagtggggcgatggtgctttcgacgccgacatgggtgcc
gaagcggttcgcaaactgctctcggcgctcgacctcgtcaagctgtcggaagaactgcgt
gaagagctgaccaccaccaacagcaagcagaagaaaaaagacctcatcaatcgtctgaag
atcgtggaatcgatccgcgacagcgataaccgtcccgagtggatggtcctcgatgtcgtg
ccggtcattccacccgatcttcgtccgctggtgctgctggatagcggcaactttgcgaca
agcgatctcaacgatctctatcgccgcatcatcaaccgcaacaaccggttgcgtaagctg
gtcgatctcaacgcgccggaagtgatcatccgcaacgaaaagcgtatgctccagcagtcg
gtcgacgctctgttcgacaacaaccgctgcaagcgtcccgtgctcggcagctcgaaccgc
ccgctcaagtcgctcaccgacatgatcaagggtaagcagggtcgtttccgcgaaaacctg
ctcggtaagcgcgtcgattactcggcccgctcggtgattgtggttggtccgcgtctcaag
ctgcaccaatgcggtttgcccaaaaagatcgcgctcgaactctatcagccgttcatcatt
cgcaagctgaaagagctcggccacgccgacaccattaagtcggccaagaagatgctagag
cgcaaggacgaggaagtctgggacattctcgaatcggcgatccagaaccatccggtgatg
ctcaaccgtgctcccacgctccaccgcatgggtatcatggcgttcgagcctgtgctggtt
gaaggtaacgcgattcacctccatccgctgtcgtgcaaaggcttcaacgccgacttcgac
ggtgaccaaatggcggtgcacttgccactttcgatcgaagcccaggtcgaagctcacacg
ctgctcttgtcgacgaacaacgtcttcgcgccgagcaacggcaagccgatcatgagcccg
tcgcaagacacggttatgggttgcaactacatcaccttggagttgccaggccgtaagggg
gagggaatgatcttctcgactcctgccgaagcccaactcgccttctcgcacggcaagatc
gaaatgcaggccaagatcaaggtccgcctgccgaagaaccagaagctcaagtccgatggg
gacgaaaagcacaagcctggcgcgattgtgcagaccacctacggacgcatcctgttcaac
tcgatgctgccccgtggcatggacttctacaacaagggtatgaagtcgggcgatctcgcg
aactgcatctccgactgctatcagctgctcggacgcaaagcgacgattaacctgctcgac
gacatgatgcagctcggcttccgcgaagcgttcctcagcggtctgtcgttcgcgaccgac
gacttgattacaccggacacgaagatcaagcacatcgccgaagctgaaaaaacggtgatg
aagtacaagaagctctacgagcgcggcgtcatcaccgaaaaagaacgctacaaccaggtg
ctcgacacttggacccatgctcgcgaagcgatcacgggtgaaatgcgtgaagcgatgcgt
accgacgatcgtggcggcaacggctacgtgaaccctgtgtacctgatggccgactcgggt
gctcgtggtggtatcgaacagattcgtcagctcgctggtatgcgtggtctgatggccaag
ccaacgggcgaaatcatcgaaaccccgattaagtcgaacttccgcgaaggtctcacggta
ctcgagtacttcagctcgacgcacggtgcccgtaagggtctggccgatacggctctcaag
acggctgactcgggttacttgacccgtaagctcgccgacgtggcccaaaacgtggtggtc
acgctgcacgactgcggaacaacccaaggtatcaccaagggtgtgatttaccgtggtgaa
aaggtggaagtgaagctctcggcagcgatcatcggtcgcgtcagccgccagagcatcgtg
aacccaatcaccgacgaggtgatcgtccgcgaaaatgacctcgtgacaccagaaattgct
cgtcgcatcgaagacctcggcctcgagcgaattcaagttcgcagctcgatgacttgcgaa
gcgcctctcggtgtttgccgcctctgctacggcatggatctctcgaccggttcgctggtg
gaagaaggcatggccgtcggtatcatcggcgctcagtcgatcggtgaacccggtactcag
ctgacgatgcgtacgttccacatcggtggtacggtaaatacgagcgtcgaagagtcggag
acgaaggccaagaaggaaggtatcgtcaagttcactcgcatgcggtttgtggcgaacgaa
gaaggcaacaacatcgttctcacccggaacggcgaaatcctgctcctcgacccacgtggt
cgcgagctcgagaagtacgacgtgccgaacggtgcgattctccgcgtcaaagaaaacgac
gtggtgaagcctggccaagtgctgtgcgaatgggatcctcactcgattccgattctttcg
gaagtcgccggtaaggtccgctacgaagacgtggtggaaggcgaaaccctccgtatcgaa
aaagatagcggtggcaacgctcgtcgcttgatcatggatcataagggcgaattgcacccg
caaatcgtgctcgaagactccgaaggcaagccactcgacgtctactacctgccagaacgt
gcccacgtggtggtcgaagaaggcaaggtgatttccgctggttcggttctcgccaagacg
cctcgcgaagcggctggtattaccgacatcaccggtggtctccctcgcgtgaccgaaatt
ttcgaagctcgcaaaccgaaagaccctgccgtgatggcggaagtcgacggtgtggtcgag
attctgcaagagaagcgtcgtggcaagcgtacgattgtggtccgcagcgaaagcggtatc
gaacgcgagcatctggtgccgcacggtaagcgattcctcgtgcactcgggcgaccatgtg
aaagctggtcaggccctggtggatggaccactcgtgcctcacgatattttgcgtatttcg
ggtgaagaggcactgcagcagtacctcgtgcacgaagtgcaaaacgtctatcgcagccaa
cgtgtggatatcaacgacaagcacatcgaaatcatcatcgctcgcatgctccgcaaggtg
cgtatcgagagcgctggtgacacgaacctcctgccaggtttggtgatggaccgcttcgac
ttccgtgccgtcaacacgaacctgtcgaagtgcctgaagatcacgcacaagggtgacagc
gatttcgctgtcgactcgattgttccgaaggaagcactcgagcaagtgaatgctcaaatc
gaggcgcttggtggcgacgcagctcgtggcagcaagccgaagtcggctactgccagcacg
cagctgctcggtatcaccaaggcagcggtgcaaagcagcagctttatctcggctgcgagc
ttccaggaaacaacgaaggtgctcaccgaagcagcactcgctggcaaggtcgaccatctc
gtgggtctgaaggaaaacgtgatcctggggcacttgatcccagctggtaccggtttccgc
aacttccaagagtcggaagttcgctaccgccccgaagcattgcaagcgatggccgaacag
aaggacaaagtcctcgagacagcgttcccactgctggctggcagcgatgccccgtcggaa
aactcgccaccggcaccttcgagctcgggcaagcctgctccgtcgctcgaaagcttgctc
ggtggttcggcagccagcgaatag
DBGET
integrated database retrieval system
