Pirellula staleyi: Psta_3023
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Entry
Psta_3023 CDS
T01147
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psl
Pirellula staleyi
Pathway
psl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psta_3023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psl03019
]
Psta_3023
03110 Chaperones and folding catalysts [BR:
psl03110
]
Psta_3023
03029 Mitochondrial biogenesis [BR:
psl03029
]
Psta_3023
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psl04147
]
Psta_3023
Enzymes [BR:
psl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Psta_3023
Messenger RNA biogenesis [BR:
psl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Psta_3023
Chaperones and folding catalysts [BR:
psl03110
]
Heat shock proteins
HSP60 / Chaperonin
Psta_3023
Mitochondrial biogenesis [BR:
psl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Psta_3023
Exosome [BR:
psl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Psta_3023
Exosomal proteins of other body fluids (saliva and urine)
Psta_3023
Exosomal proteins of breast cancer cells
Psta_3023
Exosomal proteins of colorectal cancer cells
Psta_3023
Exosomal proteins of bladder cancer cells
Psta_3023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NirdL-like_HTH
CbiA
DUF7342
Motif
Other DBs
NCBI-ProteinID:
ADB17688
UniProt:
D2R9D8
LinkDB
All DBs
Position
3905939..3907636
Genome browser
AA seq
565 aa
AA seq
DB search
MAKQMVFQDDARQPLLAGVSKLARAVRSTLGPRGRNAVLDKGWGSPKVTKDGVTVAEDIE
LDDPYENLGAQLVKEAASKTNTVAGDGTTTATVLAEAIFREGLKMIAAGYDPMALSRGIS
AAVEAVQNEINSIATPISEKNKKELQQIATIAGNNDPSIGTVLADAFLKVGKDGVITIEE
GRGNETTVDVVEGMQFDRGYLSPHFVTNQDDVSVEFENAYILLFEEKISTNKKLIPLLEA
ISKANKPLLIIAEDVEGEALATLVVNKMRGILQVCAVKAPGYGDRRKAIMGDIAVLTKGQ
AIFKDLGIELESVKLSDLGRAKKIKITSEATTIVGGAGSKDEINGRAEQIRREIGNTDSE
YDREKLQERLAKLAGGVAQVSCGAATETEMKERKWLLEDAKNAVQAALESGIVPGGGVAL
IRAEKALDKLKLTGDEKAGVDIIRNILDQPLRAIANNAGLDGAVVVNRVRQLKGKTEGYN
ADTNEYGDMLKFGVIDPAKVVCTALQNAASVASLLLTTEALITDIPKVGGDDDHGDHHDH
GMGGGMGGMGGMPGMGGMGGMGGMM
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagcaaatggtctttcaggacgacgcccgtcagcctctgctggctggtgtttca
aagctcgctcgtgcagttcgtagcacgctcggcccacgcggtcgtaatgcggtgctcgac
aaaggttggggctcgcccaaagtgaccaaggacggcgtgaccgtcgctgaagacatcgaa
ctcgacgacccctacgaaaaccttggcgctcagctcgtcaaggaagctgccagcaagacc
aacacggttgctggcgacggcaccaccaccgccaccgtcctcgccgaagcaatcttccgc
gaagggctcaagatgattgccgccggatacgatccgatggctctctcgcgtggcatttcg
gcagctgtcgaagctgttcaaaacgaaatcaattccatcgcgacccccatcagcgagaag
aacaagaaggaactgcagcagatcgctacgatcgctggcaacaacgatccttcgatcggc
accgttctggccgatgcgttcctcaaggtgggtaaagatggtgtgatcacgatcgaagaa
ggtcgtggcaacgaaaccaccgtcgatgttgtcgaaggtatgcagttcgatcgcggctat
ctctccccccacttcgtcaccaaccaagacgatgtgagtgtcgaattcgagaatgcctac
atcctgctgttcgaagaaaaaatctcgaccaacaagaagctcatcccgcttctcgaagcg
atcagcaaggccaacaagccgctcttgatcatcgccgaagatgtcgaaggcgaagccctc
gcaacgctcgtcgtcaacaagatgcgtggcattctccaggtttgtgccgtcaaggctcct
ggctacggcgatcgtcgcaaggcgatcatgggcgacatcgctgtcctcaccaagggtcag
gcgatcttcaaggatcttggcatcgaactcgaaagcgtcaagctttcggatctcggccgc
gctaagaaaatcaagatcacctcggaagcaaccaccatcgtgggcggtgctggttcgaag
gacgaaatcaacggtcgtgcggagcagatccgtcgcgaaatcggcaacaccgatagcgaa
tacgatcgcgagaagctccaagaacgtctcgccaagctcgctggtggtgtggctcaagtg
agctgcggtgctgcgaccgaaaccgagatgaaagaacgaaagtggctcctcgaagatgcc
aagaacgctgtgcaagcagcgctcgaaagcggcatcgttcctggtggcggcgtcgctctg
atccgcgccgaaaaagcactcgataaactgaagctcaccggcgacgagaaggctggcgtc
gacatcatccgcaacattctcgatcagcctctccgagccatcgccaacaacgctggcctc
gacggcgctgtggtggtcaatcgcgtccgtcagctgaagggtaagaccgaaggctacaac
gctgacaccaacgaatacggcgacatgctgaagttcggtgtcatcgacccagccaaggtg
gtttgcaccgctttgcagaacgcagccagcgtggcttcgctgctcctcaccaccgaagcc
ctcatcaccgacattcctaaggtgggtggcgacgacgaccacggcgatcatcacgatcac
ggaatgggcggcggcatgggtggcatgggcggcatgcctggtatgggcggcatgggtggc
atgggcggcatgatgtaa
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