Pirellula staleyi: Psta_3535
Help
Entry
Psta_3535 CDS
T01147
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psl
Pirellula staleyi
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psl03032
]
Psta_3535
03400 DNA repair and recombination proteins [BR:
psl03400
]
Psta_3535
Enzymes [BR:
psl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Psta_3535
DNA replication proteins [BR:
psl03032
]
Prokaryotic type
DNA Topoisomerases
Psta_3535
DNA repair and recombination proteins [BR:
psl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Psta_3535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ADB18196
UniProt:
D2QYN7
LinkDB
All DBs
Position
4617863..4620631
Genome browser
AA seq
922 aa
AA seq
DB search
MAKRASTGNKALVIVESPAKARTISKFLGPDYTVEASIGHIRDLPQGSKEIPKEYKGEKW
AYLGVNVDDGFTPIYIVPPDKKQHVSKLKQLLKESDSLFLATDEDREGEAISWHLAEVLN
PKVPVKRLVFHEITEEAIKGALANPRDIDDGLVRAQETRRILDRLYGYEVSQLLWRKVAP
RLSAGRVQSVAVRMIVERERARMAFRSATYFDLLGRFASAEGKEFDAELVSVGGRRIPTG
KDFDSTTGLLKDSKLLQMSEQEALALAERLKVAKFQVTGIEDRPYTRKPSDPFTTSTLQQ
EANRKLGFTARRTMDVAQSLYENGYITYMRTDSTNLAQVAIDAARDLVRTEYGDAFVPAQ
PRIYKSKVKNAQEAHEAIRPAGHPFKLPQNLRSELNPDQFRLFDMIWKRTIASQMADARG
RNITITLEGDGAVFQVTGKTIEFAGFLRAYVEGSDDPDAELADQERILPSVDKGYPLNIK
KLDAKSHTTQPPARFSEASLTAALEERGIGRPSTYASIIETILARQYVFKKGNALVPTWT
AFSVSKLLEMHLPKLVDYQFTAQMEDLLDSISRKESEHGEYLRQFYFGDVKPQSDAGHSM
AVGDEGLKKLLETKIQEIDARDMSRFSLGKPEEGGDEVFVRVGKFGPFIEQGERKASIQQ
ETAPDEITLARALEMLNQASVAEEPLGLDPETQKPVYMKQGRFGPYVQLGTADDEEKPKN
ASLLKGMTPPDVTLEVALKLLSLPRNLGVHATLGEPIQAFNGKFGPYIKCGSETRSLPKE
ISPLEVTAEQAIELLAQPKTRGGGRGQAAAREPLRTLEPSPVTNEPIKLLAGRYGAYVTD
GQTNASLPKDMQPETLTHEQAVQLLADRAAKAPAGGRGRRKAAPKKAAVKKAAPKKAAAK
KGAKKAAPEKKKVVDVPFEVEE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacgagccagtaccggaaacaaggcattggtgatcgtcgaatcgcccgccaag
gcgcgaacgatctccaaattcctcgggccggactacaccgtcgaggcgagtattggtcac
atccgcgaccttcctcagggctcgaaagagattccgaaggaatataaaggtgaaaaatgg
gcctatttgggcgtgaacgtcgacgacggcttcaccccgatttacatcgtcccgcccgat
aaaaaacagcacgtctcgaagcttaaacagctgctgaaagaatccgactcactctttctc
gcgaccgacgaagaccgcgagggggaagcgatctcttggcacctcgcggaagttctcaat
ccgaaagtccctgtcaaacggctcgtgtttcacgaaatcaccgaagaggcgattaaaggg
gcactggccaatccgcgcgatatcgacgatggcctggtgcgcgctcaagaaacgcgccgc
attctcgaccgcctttatggctacgaagtatcgcagctgctttggcgtaaagtggcacca
cgactttcagccggccgcgttcaaagcgtggcggtgcgcatgattgtcgagcgcgagcgg
gctcgcatggctttccggagcgctacgtacttcgacttgctcgggcgttttgcctccgcc
gaagggaaagagttcgatgccgaactcgtctcggtcggtggacgccgcattccgaccggc
aaagacttcgattcgacgaccggtctgctgaaggacagcaagctgctgcagatgtccgag
caagaggcgctcgctttagccgagcgtctgaaggtggccaagtttcaagtcaccggtatc
gaagaccgcccctacacacgtaagccttccgatccattcaccaccagcacgctgcaacaa
gaggccaaccgcaagcttggtttcactgcgcgtcgcacgatggacgtggcgcaaagcttg
tacgaaaacggctatatcacttacatgcgtaccgactctacgaacctggcgcaagtggcc
atcgacgccgcacgcgatctggttcgcaccgagtatggcgatgcctttgtcccggctcag
ccgcgcatctataaatcgaaagtgaagaacgcgcaggaagctcacgaagccattcgtcct
gctggtcatccgttcaaattgccgcagaatctccggagcgaactcaaccccgatcagttc
cggctgttcgacatgatttggaagcgcacgatcgccagccaaatggccgacgctcgtggt
cgcaacatcacaatcaccctcgaaggggacggcgccgtctttcaagtcacgggcaaaacg
atcgaattcgcgggctttctgcgagcctacgtcgaaggctccgatgatcccgatgccgag
cttgcagatcaagaacggattctcccgtcggttgacaagggatatccccttaatatcaaa
aaactcgacgccaagagccatacgactcagcctccagcgcgattcagcgaagcctcgctc
acggcagcgctcgaagagcgcgggattggtcgcccgagtacatacgcctcgattatcgaa
acgattctcgcccggcagtatgtcttcaaaaagggtaatgcgctcgttccaacttggacg
gcgttcagcgtctcgaagcttctcgaaatgcatttgccaaaactggtcgactatcagttc
accgcgcaaatggaagacttgctcgactcgatcagccgcaaagaatccgagcatggcgag
tacctccgtcagttctacttcggcgacgtcaaaccgcagtccgacgctggccactcgatg
gcggtgggggacgaggggctcaagaaactgctcgagaccaagattcaagagattgatgcg
cgcgacatgagccgcttctccctcggaaagcccgaagaaggtggcgacgaagtcttcgta
cgcgtcggcaagttcggcccgttcatcgagcaaggtgagcggaaggcaagcattcagcaa
gagacagcgcccgacgaaatcaccctcgctcgcgccttggaaatgctcaatcaagcgagc
gttgccgaagaaccgctggggctcgatcctgaaacacaaaagccggtctacatgaagcag
ggacggtttggtccttacgtgcagctcggcacagccgacgatgaagaaaagccgaaaaac
gcctcgcttttgaagggcatgacacctcccgatgtcactctcgaagtggccctcaagctc
ctttcgctcccccgcaatctcggtgtgcatgccacgcttggcgaaccgattcaagccttc
aacggcaagttcggaccgtacatcaaatgtggtagcgaaactcgctcgctccccaaagaa
atttctccgctcgaagtgacggcagagcaagcgatcgagcttctggctcagccgaaaacg
cgtggtggtggtcgtggtcaggcagctgctcgcgagccactccgcacgctcgaaccctca
cctgtgactaacgagcccatcaaattgctcgctggccgctatggggcgtatgtcactgac
ggacagacaaacgcctcgcttccgaaagatatgcagcccgaaactctcacgcacgaacaa
gcggtgcaattgctggccgatcgtgccgcgaaagctccggcaggtggacgcggacgtcgc
aaagcggctcccaagaaagctgcagtaaagaaggccgctccgaaaaaggctgccgccaaa
aagggagctaaaaaagcagcccccgaaaagaagaaagtggtcgacgttccgtttgaagtc
gaagagtaa
DBGET
integrated database retrieval system
