Pirellula staleyi: Psta_3747
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Entry
Psta_3747 CDS
T01147
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
psl
Pirellula staleyi
Pathway
psl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Psta_3747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psl03019
]
Psta_3747
03009 Ribosome biogenesis [BR:
psl03009
]
Psta_3747
Enzymes [BR:
psl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Psta_3747
Messenger RNA biogenesis [BR:
psl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Psta_3747
Ribosome biogenesis [BR:
psl03009
]
Prokaryotic type
rRNA processing factors
Psta_3747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ADB18402
UniProt:
D2R037
LinkDB
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Position
complement(4872005..4873681)
Genome browser
AA seq
558 aa
AA seq
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MPDPSKPDRWRSLLESFGLAAPASQTQPELSSAPSAEPVAAEPSASVPVENVADVPEVVS
QQRIASTLPPPPAKPKPKPTTTAPPGKRSSWSQLAGQLGLEVPPEPVPLPEPLAAMLAAQ
PLQQAPVTPQAPPALTGFSPAPSHPVAPPPPAPVQPAPAAASAKSVWDEDTSEFPAPGPA
NLQEDFRGRRRGRGRGRDRVRRDEAPAAESAPRVSSEAPRAPRPPRDVERRDFEKRDLER
RDVERRDLEKRDLDKRDIDKRDFDYVDDDEEVATGAVIEYGIDDAPLAGSDAPTPSDDSS
EGRKRRRRRRGRGRRGRGGAEAPVSDAIPSPGRAPLEDEELDEVLPQRGFSDRDEPAPVR
GESRGDFARRDFIDEDAEPVDDGSDTELPIAGEARARDEEPAREGVRRRRRRRRRGGRDR
ETTGAAPPREVRPATSRSIDDEDDDDDLDDVSYAGRSPRRGRSESPEPRRAPSGRGESGR
GEPVRSEAGRSEVSRDRDDLDHDDHDDGDEHGEELSLHKKIPTWEDAVGSIVDGNIAARS
SRPEHGGRGRRGGGRGGR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatccgtcaaaacctgaccgctggcgttctttgctagagagctttggcctcgct
gcccctgcttcgcagacccagcccgaactttcctcggccccttctgccgaacctgttgcc
gctgaaccctctgccagcgtgcctgttgaaaatgttgctgacgtgcccgaagtggtttcg
cagcagcgaattgcgtcgacacttccacctcctcccgccaaaccaaagcccaagccaacc
acgaccgcacctcctggcaaacgcagcagctggtcgcaattagcaggtcagctggggctg
gaagttccgccggaacctgttccgctccccgagcccttggccgccatgctggctgctcag
cctctgcagcaggcaccagtgacgccgcaggcaccaccagctctgacggggtttagcccg
gctccatcccaccccgttgcaccacctccaccagccccagttcagccagcgcccgcagca
gcgtctgcgaagtcggtttgggatgaggacaccagcgagttccctgctccgggtcctgcc
aaccttcaagaggattttcgaggacgccgtcggggccgtggtcgcggacgcgaccgagtg
cggcgcgatgaagctcctgctgctgaaagtgctcctcgcgtttcgagcgaagcccctcgc
gctccacgtccaccacgtgatgtcgagcgtcgagatttcgagaagcgagacctggaacgc
cgcgacgtcgagcgccgtgatcttgagaagcgtgatcttgataaacgcgatatcgacaag
cgtgacttcgattacgtcgatgacgatgaggaagtggccaccggcgctgtgattgagtac
ggcatcgacgatgctcctctcgctggatctgatgctcccacaccgagcgacgattcgagc
gagggtcgcaaacgccgtcgccgccgccgtgggcgtggtcgccgtggacgtggaggggcc
gaagccccggtcagcgatgcaattccatcaccaggccgcgcaccgcttgaggatgaagaa
ctcgacgaagtgcttcctcaacggggatttagcgaccgcgatgaaccagcgcctgttcgt
ggtgaatcgcggggcgactttgctcgccgcgatttcatcgatgaagatgccgaaccggtc
gacgatggaagtgacacggaattgcccatcgctggtgaagctcgtgcacgtgatgaagaa
ccagctcgcgaaggtgttcgccgccgccgccgtcgtcgtcgacgagggggacgcgaccgc
gaaaccaccggtgccgcaccaccgcgtgaagttcgtccagccaccagccgcagcatcgac
gatgaagacgacgacgatgatttggacgacgtttcgtacgccggtcgctcgccgcgccgg
ggacgtagcgaatcgcccgaaccacgtcgcgctccgagcggtcgaggtgaatctggccga
ggtgagcctgttcggagtgaagcaggccgtagtgaagtttcacgcgatcgtgatgatctc
gatcatgatgaccatgacgacggcgatgaacatggcgaagagctttcgctgcataagaaa
atcccgacctgggaagatgccgtggggtcgatcgtcgatgggaacatcgcagcccgcagc
agccgacccgagcatggtggccgcggccgccgtggtggcggtcgagggggacgttag
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