Pirellula staleyi: Psta_3785
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Entry
Psta_3785 CDS
T01147
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psl
Pirellula staleyi
Pathway
psl03030
DNA replication
psl03410
Base excision repair
psl03420
Nucleotide excision repair
psl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Psta_3785
03410 Base excision repair
Psta_3785
03420 Nucleotide excision repair
Psta_3785
03440 Homologous recombination
Psta_3785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psl03032
]
Psta_3785
03400 DNA repair and recombination proteins [BR:
psl03400
]
Psta_3785
Enzymes [BR:
psl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Psta_3785
DNA replication proteins [BR:
psl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Psta_3785
DNA repair and recombination proteins [BR:
psl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Psta_3785
NER (nucleotide excision repair)
GGR (global genome repair) factors
Psta_3785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
BCDHK_Adom3
Motif
Other DBs
NCBI-ProteinID:
ADB18440
UniProt:
D2R075
LinkDB
All DBs
Position
complement(4921435..4924335)
Genome browser
AA seq
966 aa
AA seq
DB search
MVDAAEAPEPETPLGDSTVYVIDAHSLIYQVFHAMPEMTSPSGQPVGAVQGFVRDMLDLI
ENRSAEYIVAAFDHPSPTFRHTMYENYKVHRDEMPGDLQSQIPIIQQFLDALGITQLSIP
GFEADDILATLAKRVASDGGRCLVVTSDKDCRQLINDRVQMLNLRKNEIFDDVALMATWG
IRPDQVVDFQSLVGDSVDNVPGVPLIGPKIAQELLAKYETLEGVLDNADQVSGAKRKENL
KNFRDQAFLSRDLVRLKNDMEFDLDWSSVRVGRYQIEMLMELCRACGFRQLLTRIEKLAK
RGAPAKSSRSTGYSSSIPAPQRDRDTPPDELYAGTEAADSQTSPSGSLGPQVAAAPWEAT
YRRVESLDQLRTIIDEIKAAGSLVIDTETTSVQPRWAEIVGYSFCYRDGEAWYLPIRAPE
NEQALCLDATAVADLFRPVLEDPAIAKVGQNIKYDMVVLRSAGIELRGAAFDTMVADYLI
DPGERSHNLDELARRHLGHQNIEIESLIGTGKKQIRMDQVPLAAITDYAAEDALVPYRLL
PILEPRLEQDGLVPLFRDLEMPLVEVLAELEHRGIKVDRARLVELSTDFSTKITALENEI
YAINHGEFNIDSRLQLAKLLFEDLKLPILKKTKTGPSMDAEVLEDLARLHELPKKVLEYR
HLAKLRSTYVDSLQELIHPVTGRVHTSLKQDVAATGRLSSQDPNLQNIPVRTAEGRAIRS
AFQPGIEGWKLMAADYSQIELRVLAHFSGDAALAEAFASDRDIHTQVASQVYEVAPGDVT
PEMRRSAKAINFGVIYGQSPFGLARSLGIENDEAAAFISAYFAQYPGVDDFMRETLIGCR
KQGYVTTIAGRRRPVTGVRDPHAVNDKRQRTLPERIAINTVIQGSAADIIKRAMITVHRR
LKEEKLQARMLLQIHDELLFEFPPEEQGQLRDLVVESMSTAEKISVPLKIDVKTGLNWAD
CEPLGK
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatgcagccgaagctccagagcctgaaacgccgctgggggacagcacggtctat
gtcatcgatgcccattcgttgatctatcaggtgtttcacgcgatgccggagatgaccagt
cccagcggtcagccggtcggtgcggtgcaaggttttgtgcgcgacatgctcgatttgatc
gagaaccgcagcgccgagtacatcgtcgccgccttcgatcatccctcgccgacctttcgt
cacacgatgtacgaaaactacaaagtccatcgcgacgaaatgccgggggatctgcaatcg
caaattccgatcattcagcagttcctcgatgcgctggggatcacgcagttgtcgatcccg
ggcttcgaggccgacgatatcctggcgaccctggccaaacgtgtggcgagcgacggtggc
cgctgtctggtggtcacgagcgacaaagattgccgtcagctgatcaacgaccgggtgcag
atgctcaatcttcgcaagaacgagattttcgacgacgtggccttgatggcgacgtggggg
attcggcccgatcaggtggtcgattttcagtcgctcgtcggtgactcggtcgacaatgtc
cccggcgttccactgatcggtccgaagatcgctcaggaattgctcgcgaagtacgaaacg
ctcgaaggggtgctcgataacgccgaccaggtgagtggtgccaagcgaaaagagaacctg
aagaactttcgagatcaggcatttctgagtcgcgacctggttcgtctgaaaaacgatatg
gagttcgacctcgactggagcagtgtgcgcgtcggccggtatcagatcgagatgctgatg
gaactgtgtcgcgcgtgcggtttccggcagctgctcacgcggattgaaaaactagcaaag
cgcggcgcccccgccaaatcatcgcgatcgacaggctattccagcagcattcctgcaccc
cagcgcgatcgcgatactcctcccgacgagctttatgccggcactgaagcagccgatagc
caaacaagtccctctggcagtttggggccgcaagttgccgctgctccttgggaagccacc
tatcggcgcgtggagtcgctcgatcaactccgcaccatcatcgacgagattaaagctgca
ggcagtttggtgatcgataccgaaactacgagcgttcagccgcgctgggccgagattgtc
ggttattcgttttgctatcgcgatggtgaagcgtggtacttaccaattcgcgcgccggaa
aatgagcaggcgctctgtctcgatgcgacagcggtcgcggatctctttcggcccgtgctg
gaagatcctgcgattgccaaagtggggcagaacatcaagtacgacatggtggtgctccgt
tccgccggtattgagttgcgtggcgctgcgttcgacaccatggtggccgattatttgatc
gatcccggcgaacgaagtcataatctcgacgaacttgcgcggcgtcatctggggcaccaa
aatatcgagatcgagtcgctgatcggtaccggaaaaaaacagatccggatggatcaagtt
ccactcgccgccatcaccgactacgccgctgaagatgcgctcgttccctaccggctgctc
cccatcctcgagccgcgactcgagcaagatggtctcgtgccactatttcgcgatctcgag
atgccactagtcgaagtcctggcggaactcgagcatcgagggatcaaggtcgaccgcgct
cgtctcgtcgaattgagcaccgatttctcgacgaagattaccgcgcttgaaaacgagatc
tatgcaatcaaccacggggagttcaacatcgactctcgattgcaactcgcaaagctgctg
tttgaagacctgaagctgccgattctgaagaaaacgaagaccggccccagcatggatgcc
gaggttctcgaagacttggcgcgactgcacgaattgcccaaaaaagtgctcgaatatcgc
catttagcaaaacttcgcagcacctatgtcgattcgctacaagagttgattcatccggtg
actggtcgtgtccacacgtcgctgaaacaagacgtggccgctacgggacgactgagttcg
caagatcccaacttgcagaacattcctgtccggactgctgaaggacgcgcgattcgctcg
gcatttcagccaggcatcgagggctggaaactgatggcagccgactattcgcaaatcgaa
ctacgagtgctcgcgcacttcagtggtgatgccgcgctggcggaagcgtttgccagcgat
cgcgacattcacacccaagtggccagccaggtgtatgaagtcgcgccaggcgatgtcact
cccgaaatgcggcgatctgccaaggcgattaacttcggtgtgatctatggccaaagtcct
ttcggactcgcccgatcgctagggatcgagaacgacgaagcagctgcctttatctcggcc
tactttgcgcagtatcccggtgtcgacgacttcatgcgcgagactctgatcggctgtcgc
aagcaaggctatgtcaccacgattgcgggccgcagacgtcccgtcacgggcgttcgcgac
cctcatgccgtgaacgacaaacggcagcgcacactccccgaacggatcgctatcaacacg
gtgattcaaggctctgcggccgacatcatcaagcgggccatgatcacggtgcaccgtcga
ctgaaggaagaaaaattgcaggcacgcatgctgctgcagattcacgacgaactgctgttt
gaatttccaccggaagaacagggccagcttcgcgacttggtagtggagtcgatgtcgacc
gccgagaagatttcggtgccactgaaaatcgatgtaaaaacggggctcaactgggccgac
tgcgaaccactggggaagtga
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