Pirellula staleyi: Psta_3972
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Entry
Psta_3972 CDS
T01147
Name
(GenBank) Exonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
psl
Pirellula staleyi
Pathway
psl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Psta_3972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psl03400
]
Psta_3972
Enzymes [BR:
psl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Psta_3972
DNA repair and recombination proteins [BR:
psl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Psta_3972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
ADB18626
UniProt:
D2R215
LinkDB
All DBs
Position
complement(5160404..5160787)
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AA seq
127 aa
AA seq
DB search
MSTDSKPTEPKPIDKSLSFEESLTKVEQVVRSLEEGQLGLGPSIEAYERAVSHLKYCYGL
LAAAERRVELLTAVSPEGEALTAPFDDVATQAASEAAPARRKRAIKKGSTGGDASGDAAA
DLLSGLD
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgactccaaacccaccgagcccaagcccatcgacaagtcgctgtcgtttgaa
gaatcgctcaccaaggtcgagcaggtggtccgttcgctcgaagagggccaactgggattg
gggccttcgatcgaggcttatgaacgagcagtgagccatttgaagtattgctacggactt
ctcgcagcagccgagcgccgcgtggagctgctcacggctgtcagccccgaaggcgaggcg
ctgacagctccgtttgacgatgtcgctacgcaggcggccagcgaagcagctccggcgcgt
cgaaagcgggcgattaaaaaaggatccactggtggtgatgcgagtggcgatgcggcagcc
gatctgctgagcggcctcgattag
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