Pirellula staleyi: Psta_4219
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Entry
Psta_4219 CDS
T01147
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psl
Pirellula staleyi
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psl03016
]
Psta_4219
Enzymes [BR:
psl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Psta_4219
Transfer RNA biogenesis [BR:
psl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Psta_4219
Prokaryotic type
Psta_4219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ADB18867
UniProt:
D2R418
LinkDB
All DBs
Position
5512817..5513674
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AA seq
285 aa
AA seq
DB search
MRTFKLTLAYDGTNFGGWQWQPNRRTVQDELEKAVETITGVRSRFVASGRTDAGVHALGQ
VAAFSSETGIDPAGLLKGLNAKVPDDIFIFDVVEVPLAFHPIRDAVRKRYRYVVQDGPLR
DIFDRQYAWHVRQPLDEQAMLEASRLLLGEHDFASFQTSGSSRLTTERNVLDISVERVDG
ARTSRVHVEVEADGFLFNMVRNIVGTLVEVGKGTRPVAWTREVLESRDRRRAGMTAPAQG
LFMIGVHYDADSTSMERVAPSADPRNLQGLGVRVMGQPIAADEQE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacgttcaaactcacgctcgcctacgacggcaccaactttggtggttggcaatgg
cagccgaatcgacgtaccgtacaagacgagcttgaaaaagcggtcgaaaccatcacggga
gttcgctcccgtttcgtcgccagcggccgcaccgatgcgggcgtgcatgccctcgggcaa
gtggcagccttctcgtcggaaaccggtatcgatccggcgggtctcctgaagggactgaat
gccaaagtcccggacgacatcttcatttttgatgtcgtggaagttccgctggcgtttcat
ccgatccgagatgcggtgcgtaagcgttatcgttacgtggtgcaagatggtccgctacgt
gacattttcgatcgtcagtatgcgtggcatgtgcgacagccgctcgacgagcaggcgatg
ctcgaagcttcacgactactgctcggggagcatgattttgccagctttcaaacgagtggc
tcatcgcggctaacgaccgagcgaaacgtgctcgacatcagcgtcgaacgggtcgatgga
gcgcggacgagtcgcgtgcatgtggaagtggaggctgacggctttctgttcaacatggtg
cgaaatatcgtcggcacgctggtggaagtggggaaggggacgcgccccgtggcatggacc
cgagaggtgctcgagtcgcgcgatcgacgccgtgctgggatgaccgctccggcgcaaggg
cttttcatgatcggcgtgcactacgacgccgattcgactagcatggagcgagttgctccg
tcggcagatccgcgcaacctgcaagggctcggggtgcgtgttatgggacagccgatcgcg
gccgacgaacaggagtag
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integrated database retrieval system
