Pirellula staleyi: Psta_4648
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Entry
Psta_4648 CDS
T01147
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
psl
Pirellula staleyi
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psl03009
]
Psta_4648
Enzymes [BR:
psl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Psta_4648
Ribosome biogenesis [BR:
psl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Psta_4648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ADB19290
UniProt:
D2R7V9
LinkDB
All DBs
Position
complement(6046395..6048830)
Genome browser
AA seq
811 aa
AA seq
DB search
MNRRKPNYRTSSRSQSRSKNAPEKQIGPDGVVAERLQKVLAAAGIGSRRDCEELITEGRV
DVDGKVVTELGTRVDPVKQTIRVDGEALRKPQRLYFVVNKPEGVVTTNYDQAGRTRVIDL
VPTDERVFAVGRLDRASEGLIIVTNDGEFANRVTHPRYGVTKTYLVRVAGEASTAELAKL
RRGIHLSDGFCKVDAIQVKRRHKQSTDMVIQLSEGKNREIRRILARIGHKVLKLKRLAVG
SLKLGELPLGAWRWLDKQEIERLLSEARLRRKENKKGKSATATTADGKAAPKKPAKSAGA
IRDEQGPSEEVLRTLPQAHKPLSLDDLLGDEETGLSSDETMDLAPRHPASKPAGKSGKKN
ATPFDDESDLDDMLVSDELDDDFEMEDHYGDDSQEDSAEADDDARYESDDFEAPLDVSDA
DEVADEELLASDLSLDLADGSFERPRNRRANVISYEDDEAPAASETAALTGDIEDSLGNE
DGDEPPARRTSKRSPAGAPRAERVPRGDRAPRGDRPPRGDRPARTDRPARGERPSRGERP
ARAEGAPQGDRPSRGDRPGRGERPARGERPQRGERPARGEGRPPRKPAGEYSESGYQNDA
GGGPRRPTRGGRPGRKPTGPRPEGARSEFRSEGRPEGRAEGRDGGRPAGRPGGRPSRPGA
RPGGRPGGRPGGFRSREEGVESGEGRPAEGRRFGKGGGRPFRGGPREEVRDGGGSGYGTG
FSGGRGGDARGGESRGGEGRPTGGRGRPSGRPGVRGGKPFAGKSMGGEGGGESSRGSRGG
GRAGAGRGGPPQERKGRVINSTSKSRGKKRR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcgtaaaccgaattatcgtacctcctcgcgctcgcagtcgcgcagcaagaat
gctcccgaaaaacagatcggtcccgatggtgtggtcgccgagcgtttgcaaaaggtgctc
gctgcggcaggcatcggcagccgccgcgactgcgaggaactgatcaccgaagggcgtgtc
gatgtcgatggcaaggttgtcaccgagcttggtacccgcgtcgatccggtgaagcaaacg
attcgcgtcgacggcgaagcgctccgcaaaccacagcggctttacttcgtggtcaacaaa
cctgaaggggtagtgaccaccaactacgatcaggctggacggacccgtgtgatcgacctc
gtgccaaccgatgaacgggtgtttgccgtcggtcgtctcgaccgcgctagcgaagggctg
atcatcgtcaccaacgatggcgagtttgccaaccgcgtcacccaccctcgctatggcgtt
acgaagacctacctcgtccgcgtcgctggcgaagcgagcaccgctgaactcgccaagttg
cgtcgtggtattcacttgtccgatggcttttgcaaggtcgacgccatccaagtcaaacgc
cgccataagcaaagcaccgacatggtgattcagctgtcggaaggcaaaaaccgcgaaatc
cgccgcattttggcccgcattggccacaaggtgctcaagctcaagcgactcgccgttggc
agtcttaaactcggcgaacttcccctcggcgcctggcgttggctcgataaacaagagatc
gagcgtctgctgagcgaggcacgccttcggcggaaagaaaacaaaaaggggaaatcggcc
accgccaccacagccgacggcaaagctgctcccaaaaagccagccaagtcggctggcgca
attcgcgacgagcaaggaccttcggaagaagtgctccgcacgttgccgcaagctcacaag
ccgctctcgctcgacgatttgctcggcgacgaagagaccggcctatcgtcggacgagacg
atggacctggctccacgtcatccagcctccaaaccagctggcaagtcgggcaaaaagaac
gccacaccgtttgacgacgagagcgatctcgacgacatgctggtgagcgacgaactcgac
gacgacttcgaaatggaggaccattacggcgacgactcgcaagaggactccgcagaggcc
gacgacgatgctcgctacgagtcggatgatttcgaagctccgctcgatgtgagcgatgcc
gatgaagtggccgacgaagaattactcgcttccgacctgtcgctcgatttggcggatggt
agtttcgaacgacctcgtaatcgccgcgcgaacgtgatttcgtacgaagacgacgaagcg
cctgctgcaagcgaaaccgccgcattgacgggggatatcgaagattctctcggaaacgaa
gatggggatgagccacctgcacggcgcacttcgaagcgttctcccgcaggtgcacctcgt
gccgaacgggttccgcgtggcgatcgtgctcctcgaggtgatcgtccaccgcgtggcgat
cgtcccgctcgcacggatcgccctgcacgtggtgaacgaccaagtcgtggcgaacgtccc
gctcgcgctgaaggtgctcctcagggggatcgaccatcacgcggtgatcgacccggccga
ggtgagcgtccagcccgcggagaacgaccacagcgtggcgagcgtcccgcgcgtggtgag
ggtcggccacctcggaagccagccggtgaatattccgaaagtggctaccaaaacgatgct
ggtggcggtccacgtcgcccaactcgtggcggtcgacctggtcgtaaaccgacgggacct
cgtcccgaaggggctcggagcgagtttcgcagcgaaggtcgcccggaaggacgtgctgaa
ggtcgcgatggtggtcgtccagcaggacgccctggcggaagaccaagtcgccccggggct
cgtcccggaggccggcctggtggtcgtcccggcggattccgctcgcgtgaagagggggtg
gagtcgggcgaaggtcgccccgctgaaggccgtcgtttcggaaagggtggcggtcgtccg
ttccgtggtggacctcgtgaagaggtgcgcgacggtggtggcagcggctacggcacaggc
ttttccggtggtcgtggaggtgatgcccgcggtggagaatcgcgcggcggcgaaggtcgc
cctactggaggtcgaggccgtccatcgggacgtcctggagttcgtggcggaaaacctttc
gccggtaaatccatgggtggtgaaggtggcggcgagagttcccgaggatcgcgaggaggt
ggtcgagccggcgctggtcgcggcggaccccctcaggaacgtaagggccgcgtgattaat
tcgacttccaagagccgaggaaagaagcgtcgatga
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