Pirellula staleyi: Psta_4653
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Entry
Psta_4653 CDS
T01147
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
psl
Pirellula staleyi
Pathway
psl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Psta_4653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psl03400
]
Psta_4653
Enzymes [BR:
psl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Psta_4653
DNA repair and recombination proteins [BR:
psl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Psta_4653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_16
ATPase_2
SLFN-g3_helicase
T2SSE
TrwB_AAD_bind
PolC_DP2
Motif
Other DBs
NCBI-ProteinID:
ADB19295
UniProt:
D2R7W4
LinkDB
All DBs
Position
6054095..6056404
Genome browser
AA seq
769 aa
AA seq
DB search
MTPSQASLFDRTPDAWDLDAAQVQLVAEVVFRDPPFGPFDYLIPEPLAPRLKPGARVQVP
LGASREVVGYCTSVTSKPASGRPLKAIAAVIDDVPLVERKMLELTRWMSDYYLCPWGQVL
HGVVPAGVRGNAGTRETTFLSLSAEGRQILASGVDRSGEKPKKVLPAHLEILRILGTSPR
ELTPVELGEFASCSIAQITGLRKKKWIASDVRRVRSSSHEELPLARTEPLALHPAQSHAL
AAINRAIDRRTSATILLHGVTGSGKTEVYIQAIERVISFGQQAIVLVPEISLTPQTRQRF
RSRFDRVAVLHSHLSDAERHYHWEQIARGEVQVIVGARSAVFAPAPHLGLIVIDEEHDGS
FKQSEAPRYHARDVAEHRALQLGIPLVLGTATPSLESYYRARSGKYELVPMPDRVEGREL
PHVGTIDLRVEFQSRSSRGSIGRQLHTAIAQAIAEKGQVILLLNRRGYSTHVQCPACGFV
AKCEHCDLALTHHREEQLLVCHHCDFTTKPPERCPDCTFDGIRYSGLGTEKLEAEIKARF
PAAKVLRMDSDTMQKPGSHEAALAKFRSGEVQILLGTQMIAKGLDFPNVTLVGVINADTA
LHLPDFRAAERTFQLVTQVAGRTGRGELGGRVLVQTFSPDHPAIEAAVDHDYAKFVGREL
PDRVAHGFPPFTTLLRLIVRGDSESKTREFATMAAESWKKLLEAKQCEHRILGPAPCAVA
RLRGKFRFHALATSVDSDTLRATFREASSTWKTPDDVQWVIDVDAIDLL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgagccaggcatctctgttcgatcgcacgcccgatgcgtgggatctcgatgcc
gcgcaggtgcaactggtggccgaggtggtgtttcgcgatccgccgttcggcccgtttgac
tatctgattcccgagcctttggctccgcgacttaagccaggcgctcgggtgcaagttccg
ctgggagcaagccgcgaagtggtcggctactgcaccagcgtgacgagcaagcccgcttca
ggacgtccgctcaaagcgatcgccgctgtgatcgacgacgttcctttggtcgagcgcaaa
atgctcgaactcactcgctggatgtctgactattacctctgcccttgggggcaagtgctg
catggcgtggtgcctgcgggtgtgcgcggcaatgctggtacgcgagagaccacgttcctt
tcgctctcggccgaggggcggcagattttggccagtggcgtcgatcgctcgggagagaag
cccaagaaggtgctgcccgcgcatctcgaaattttgcgcatactgggcacctcgccgcgc
gagcttacgccagtcgagctgggcgagtttgccagctgcagtattgcgcagatcacgggg
ctccgtaagaagaagtggattgcgtcggatgtgcgccgcgttcgtagcagttcgcacgaa
gagctgccactggcgaggactgagccactggcccttcatccggctcagtcccatgctctg
gcggccatcaaccgggccatcgatcgccgcacctccgccaccattttgctgcatggcgtg
actggtagcggcaagaccgaggtttacatccaggcgatcgagcgtgtgatcagctttggt
cagcaagcaattgtgctggtgccggaaattagcctaacccctcaaacgcgccagcgcttc
cgctcgcgattcgaccgagtggcggtgctgcatagccatctatcggacgccgagcgtcat
tatcactgggagcagattgctcgcggagaagtgcaagtgattgtcggcgctcgttcggcg
gtatttgcccccgcgccccacttgggactgattgtgattgacgaggagcacgacggctcg
ttcaagcagagcgaagcgccccgctatcacgcgcgcgacgtagctgaacatcgcgccttg
cagctcgggattcctctggtgctgggcacagccactccgtcgcttgaaagctactaccgg
gcccgcagcggcaagtatgaactcgtcccgatgcccgaccgagtcgaggggcgcgagttg
ccgcatgtcggaacgattgatctgcgtgtggagtttcaaagtcgatcgtcgcgcggcagt
atcgggcgacaacttcacaccgcgattgcccaagcgattgccgaaaaagggcaagtgatt
ttgctgctgaatcggcgcggctatagcactcacgtccagtgccccgcttgcggctttgtc
gcgaaatgcgagcactgcgacttagctctcacgcatcaccgcgaagaacagctgctcgtc
tgtcatcactgcgattttacgaccaaacctcccgagcgctgccccgactgcacgtttgat
ggcattcgctacagcggactgggaaccgaaaaactcgaagccgagatcaaggcccggttt
cctgccgccaaagtgctccgcatggatagcgacacaatgcaaaaaccggggagccacgag
gcggcgctcgcgaagtttcgaagtggcgaagtgcagatcttgctcggcacgcagatgatc
gccaaggggctcgattttccgaacgtcacactcgtcggtgtgatcaatgccgacacggcg
ctgcatctgcccgatttccgagcggcggagcgtacgtttcagttagtcacgcaagtagcg
gggcgaacagggcgcggtgaactgggtgggcgcgttctcgtgcaaaccttcagccccgat
caccccgcgattgaagcagcggtcgatcacgactatgccaagttcgttggtcgcgaactc
cccgatcgtgtggcgcatggctttccacccttcaccaccttgttgcggctgattgtgcgc
ggggatagcgaatcgaaaacgcgcgagttcgccaccatggctgccgaatcgtggaaaaag
ctgctggaagctaaacagtgcgagcatcgcattttgggacctgctccttgcgctgtcgcg
cgattgcggggcaagtttcgttttcacgcgctcgcgacaagtgtcgacagcgacacgctg
cgtgccacgtttcgcgaagcctcgtcgacctggaaaacgcccgacgatgtgcagtgggtg
atcgacgtcgacgccatcgatttgctgtaa
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