Pirellula staleyi: Psta_4687
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Entry
Psta_4687 CDS
T01147
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
psl
Pirellula staleyi
Brite
KEGG Orthology (KO) [BR:
psl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psl03019
]
Psta_4687
Messenger RNA biogenesis [BR:
psl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Psta_4687
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
SPEF2_D5
Motif
Other DBs
NCBI-ProteinID:
ADB19329
UniProt:
D2R7Z8
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Position
complement(6098307..6099281)
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AA seq
324 aa
AA seq
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MPRRYINQLAERETVDEVYLVADKQLRANRNGNLYLQLRMTDKTGSLTGMLWNVTEQLGQ
SVEVGHYLRVQGTTQLYNGGMQMIVTRIDPVDATKVDEADFQSVSTAEIDALASRLAEML
RGMTSAPLRDLAECFLVDENFMTKFTQAPAGIKNHHAYRGGLLAHVVSLMELCAVVAARY
PEIDPDMLRIGVFLHDAGKINELTYERELGYSDEGQLIGHIVMAVSMVEEKVRDYQQLTG
ETFPQEMLLRIKHMILSHHGEYEFGSPKLPMTLEAIALHYLDNLDAKIYAVGQLLREDIN
SESPWTTYNAPLARKFYKGSKPQP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgccccgacgctatatcaatcagctcgccgaacgtgaaactgtcgatgaagtttacttg
gtcgccgacaagcagctgagagccaaccgcaatggcaatctctacttgcagctgcgcatg
accgacaaaaccggctcgctcactggcatgctctggaacgttaccgagcaactgggacag
tcggtcgaggtggggcactatttgcgtgtgcaggggacgacgcagctttacaacggtggc
atgcagatgatcgtgactcggatcgacccggtcgacgccacgaaagtcgacgaagctgat
tttcaaagcgtcagcaccgccgagatcgacgcacttgcttcgcggctggccgaaatgctg
cgcggcatgactagcgccccgctgcgcgacctggcggagtgtttcctggtcgacgaaaac
ttcatgaccaagttcacgcaggcccccgctggaatcaagaatcaccacgcctatcgcggc
ggtctgctggcgcatgtcgtcagtctgatggaactgtgtgccgtagtggcggctcgctat
cccgaaatcgacccagacatgcttcgcatcggcgtctttttgcacgacgctggcaaaatc
aacgagctcacctacgagcgcgaactaggctatagcgacgaaggccagctgattggccac
attgtcatggccgtgagcatggttgaagagaaagtgcgagactaccagcagctcaccggc
gagactttcccgcaggagatgctgctccgaatcaagcacatgatcttgagccatcacggc
gaatatgagttcggcagcccgaaactcccgatgactttggaagcgatcgccttgcactat
ttagacaatcttgatgccaagatctatgccgtcggccaactcttgcgcgaagacattaat
agcgaatccccttggaccacctataacgctccccttgcacgcaaattctataaaggctcg
aagccgcaaccctaa
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