Pseudoalteromonas sp. LC2018020214: JG479_00055
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Entry
JG479_00055 CDS
T10970
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc00071
Fatty acid degradation
pslc00280
Valine, leucine and isoleucine degradation
pslc00310
Lysine degradation
pslc00362
Benzoate degradation
pslc00380
Tryptophan metabolism
pslc00410
beta-Alanine metabolism
pslc00640
Propanoate metabolism
pslc00650
Butanoate metabolism
pslc00907
Pinene, camphor and geraniol degradation
pslc00930
Caprolactam degradation
pslc01100
Metabolic pathways
pslc01110
Biosynthesis of secondary metabolites
pslc01120
Microbial metabolism in diverse environments
pslc01200
Carbon metabolism
pslc01212
Fatty acid metabolism
Module
pslc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JG479_00055 (fadB)
00650 Butanoate metabolism
JG479_00055 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
JG479_00055 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JG479_00055 (fadB)
00310 Lysine degradation
JG479_00055 (fadB)
00380 Tryptophan metabolism
JG479_00055 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JG479_00055 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JG479_00055 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JG479_00055 (fadB)
00930 Caprolactam degradation
JG479_00055 (fadB)
Enzymes [BR:
pslc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JG479_00055 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JG479_00055 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JG479_00055 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
JG479_00055 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Phage_T7_tail
Motif
Other DBs
NCBI-ProteinID:
QQM64308
LinkDB
All DBs
Position
1:complement(12347..14506)
Genome browser
AA seq
719 aa
AA seq
DB search
MLYKSDSFEVSFLKENIAEFKFCVAGSVNTLSQKTLSDCAAALKELAANTDIKGMIFTSD
KDHFIIGADIFEFLPTFTKPEEELVVWIKNATDVFDAIEDLPFPTLSAINGMALGGGCEW
ALATDYRVASETAKMGLPEVKLGIMPGFGGTVRLPRIIGADNAMMWITSGAENRAADALK
VGAFDAVVSADKLLESSVSTLELAIAGKLDWQAKRNVKLQPLKLNRVEQGMSFAMAEGMV
MGKTKGHYPAPVMAVRTIKAAANCTRDEAMAIENANFAKLARTPEAAAQTGIFLADQYIK
GKARKFAKHSDVEIKQAAVLGAGIMGGGIAYQSAYKGTPIIMKDIQQDALDLGMGEASKL
LGAKVKRGHMPMEKMLATLSKIKPTLNESDLQSANIIVEAVVENPKVKQAVLADLEKNMP
EGTVLTSNTSTICIDLLAQALDKPENFCGMHFFNPVPKMPLVEIIRGAKTSDKTINAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFSKLVVEGANFAKVDKVMENVFGWPMGPAY
LLDVVGIDTAFHCTGVMADGFPERMARADKDPVTIFANEKRFGQKNKAGFYKYETDRRGR
LKKSHDETAIELLSPITDAPKEFDKQEIIDRCMIPMINEVLLCLQEGIVASPQEADMALV
YGVGFPPFRGGAFRYLDQTGLANFVAAADKYAHLGAIYQVSEQTRKWAEEGRVFYKVEG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttatataaaagcgattcctttgaagttagcttcctgaaggaaaacatcgccgagttt
aagttttgtgttgcaggttctgtaaacacactatctcaaaaaactctttcagattgcgca
gcagcattaaaagaattagccgccaatactgatatcaaaggcatgatttttaccagtgat
aaagaccactttattattggtgccgatatcttcgaatttttacctacatttactaaacct
gaagaagaattagtagtgtggatcaaaaacgcaaccgacgtttttgatgcaattgaagat
ttaccattcccaactctaagcgctataaacggtatggcacttggcggtggttgtgagtgg
gcacttgctaccgattatcgtgtggcaagcgaaacagctaaaatgggcctaccagaagtt
aaacttggcataatgccagggtttggtggcacagtgcgcttaccacgtatcattggcgcc
gataacgcgatgatgtggattacctcaggcgcagaaaaccgcgcagcagatgcccttaaa
gtaggtgcgtttgacgcggtagttagtgctgacaaacttctagagtcaagtgtatcaaca
cttgaactggcgattgctggcaagctagattggcaagcaaaacgcaacgtaaaactacag
ccacttaaattaaaccgtgttgagcaaggcatgagctttgctatggcagaaggtatggta
atgggtaaaaccaaaggccactatcctgcaccggttatggctgtacgtactattaaagca
gcggcaaactgtactcgcgatgaagcaatggcaatcgaaaacgctaactttgctaaatta
gcacgtacaccagaagcagctgcacaaactggtatattcctagctgaccaatacattaaa
ggtaaagcacgtaaatttgctaagcacagcgatgtagaaatcaaacaagccgcagtatta
ggtgctggtattatgggtggcggtattgcataccagtctgcttataaaggcacacctatt
ataatgaaagacatccaacaagatgcgcttgatttaggtatgggtgaagcatctaaattg
ttaggtgcaaaagttaagcgtggccacatgccaatggaaaaaatgttggcaacacttagc
aaaattaaaccaacacttaacgagtcagacctacaaagtgccaacatcattgttgaagcc
gttgtagaaaaccctaaagttaagcaagcagtactcgctgatcttgaaaagaacatgcca
gaaggcactgtacttacttcaaatacatcgactatttgtattgatttactagcacaagcg
ctagataagccagaaaacttctgtggtatgcactttttcaaccctgtgccaaaaatgcca
ttagtagaaattatccgtggtgcaaaaacctcagataaaacaattaatgcagtagttgat
tacgcgcttaaattaggtaaatcgccaattgttgttaacgattgcccaggcttttttgta
aaccgtgttttattcccttactttgcaggttttagcaaattagtggttgaaggcgctaac
tttgcaaaagtagataaagtaatggaaaacgtatttggctggcctatgggtccggcttac
ctacttgatgttgtaggtattgatacagcgttccattgtactggcgtaatggctgacggt
ttccctgagcgtatggcgcgtgctgataaagaccctgtgactatttttgccaacgaaaaa
cgttttggtcaaaagaacaaagccggtttttacaaatacgaaacagatcgtcgcggccgt
cttaaaaagtctcatgacgagacagcaattgagctactaagcccaattacagacgcacca
aaagaatttgataaacaagaaatcatcgaccgttgtatgattccaatgatcaacgaagtg
ctactgtgcttgcaagaaggcattgttgcctcgccgcaagaagcagatatggcattagtt
tacggtgttggtttccctccatttagaggcggcgcgttccgttacttagatcaaactggt
ttagctaactttgttgcagcagcagacaaatacgctcacctaggtgcgatttaccaagta
tctgaacaaactcgcaagtgggccgaagaaggtcgtgttttctataaggtggaaggttaa
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