Pseudoalteromonas sp. LC2018020214: JG479_00570
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Entry
JG479_00570 CDS
T10970
Name
(GenBank) response regulator transcription factor
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pslc03000
]
JG479_00570
Transcription factors [BR:
pslc03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
JG479_00570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
HTH_23
Sigma70_r4
HTH_40
HTH_10
HTH_24
HTH_5
HTH_7
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QQM64401
LinkDB
All DBs
Position
1:complement(121250..121906)
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AA seq
218 aa
AA seq
DB search
MSSSAFLLLDQEPINTIGINVLEPLLKTQGLDVTTGTNILDIPEGTRLLFIETSSKDAWG
KLKEQLVNLRIKCDIILFNLDENPELANRALLSGIRGVFYTTDNADVLMKGIRLLLEDQL
WYRRDIMCNALNRMLQFNKDALHKLTEGDIEPVKLTKREKAIISLMSKGSKNKEIAEDLS
ISPHTVKTHLYSAFRKTKCRNRIELLSWAQQNIPDEIR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttcagcctttttgttattagatcaagagccaattaacactattggtattaac
gttttagaacctttgttaaaaacgcaaggccttgacgtaaccacgggtactaatatttta
gatatacctgaagggactcgacttttgtttatcgaaacatctagcaaggatgcatgggga
aaactaaaagaacaactagtaaacctacgtattaaatgcgatatcatattatttaatcta
gacgaaaaccctgagcttgctaatcgtgcattgttgagcggtattcgtggcgtattttac
acaacagataacgccgatgtattaatgaaaggtattcgcttactacttgaagatcagctt
tggtaccgtcgcgatattatgtgtaatgcattaaatcgtatgctgcaatttaataaagat
gcgctgcataaactaaccgaaggcgatattgagcctgttaaacttactaagcgagaaaaa
gcaataatctcactaatgagtaaaggttcgaagaataaagaaatcgcagaagatttaagt
atcagtccacacacagttaaaacacatttatatagcgcatttagaaaaactaaatgtcgt
aaccgtattgagctcctatcttgggcacaacaaaatatccctgatgaaattcgttaa
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