Pseudoalteromonas sp. LC2018020214: JG479_01590
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Entry
JG479_01590 CDS
T10970
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc03030
DNA replication
pslc03410
Base excision repair
pslc03420
Nucleotide excision repair
pslc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JG479_01590 (polA)
03410 Base excision repair
JG479_01590 (polA)
03420 Nucleotide excision repair
JG479_01590 (polA)
03440 Homologous recombination
JG479_01590 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pslc03032
]
JG479_01590 (polA)
03400 DNA repair and recombination proteins [BR:
pslc03400
]
JG479_01590 (polA)
Enzymes [BR:
pslc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JG479_01590 (polA)
DNA replication proteins [BR:
pslc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JG479_01590 (polA)
DNA repair and recombination proteins [BR:
pslc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JG479_01590 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JG479_01590 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
QQM64588
LinkDB
All DBs
Position
1:350163..352898
Genome browser
AA seq
911 aa
AA seq
DB search
MAQIPENPLILVDGSSYLFRAYHSPPHLTNSKGEATGAIYGVINMLKSLIRQYDPSHMVV
IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHSIIKAMGFPLISIEGVEADDVIGT
FARIATEQKRHVLVSTGDKDMAQLVNEHVTLINTMTDSISDPVTVVEKFGVGPELIIDYL
ALMGDKVDNIPGVEGCGPKTAVKWLEKYGSLQGVMDHASEIKGKIGEKLAAALDHLPLSY
ELATIKCDVEVESDLDTFKLQEPNKDELIALYGECEFRRWLAEILDNPKDAETHLAVPTE
ATELPKVEDAHYETILTQAQFDTLIEQLNSAELFAFDTETTSLDYMKAQLVGMSFAVKAG
EAVYLPLAHDYPGAPEQLSLEFVMQKLGPILSDENKAKVGQNLKYDKSVLANAGFALNGI
KFDTMLESYVFNSVGTRHDMDSLALKYLGHKNISFEDIAGKGKKQLTFNQIELEKAAPYA
AEDADITLRLHEVLWPKIAADEKLKSVFEDIEMPLVSVISDIERTGVAIDSNMLAAHSQR
LGERLIELEKEAFEIAGEPFNLSSPKQLQVLLFEKLGLPIIKKTPKGAPSTAEEVLQELA
HDYPLPKVIIEHRGLSKLKSTYTDKLPLMVNEKTQRVHTSYHQAITATGRLSSTDPNLQN
IPIRSEEGRRIREAFIAADGYKIVAADYSQIELRIMAHLSQDKGLLNAFANGLDVHSATA
AEVFGVELDDVTTDMRRKAKAVNFGLIYGMSAFGLARQLDVPRHEAQHYIDKYFERFPGV
LEYMETTREKAAENGYVETIFGRRLHLPEINARNGARRKGAERAAINAPMQGTAADIIKK
AMLSVNRWVHEQAPNTIKLLMQVHDELVFEIKTDCAPEYTKHICELMSQAAALDVPLIVE
ADEGDNWEQAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccccgaaaacccacttattttagttgatggctcgtcatatttatttcgt
gcttatcattctccgccgcatttaactaattctaaaggtgaggctacgggcgctatttat
ggcgtgatcaacatgcttaaaagcttgatcagacaatatgatccctcacacatggtggtt
atatttgatgctaaaggcaaaacgttccgtaacgatatgtatagcgaatataaggcaaat
cgcccgccgatgccggatgacttacgtacgcaaatagcaccaatacatagcattatcaaa
gcgatgggttttccgctaattagtatcgaaggcgttgaagctgatgatgttattggcaca
tttgcacgcattgcaactgagcaaaaacggcatgtccttgtctccactggcgataaagat
atggcgcaacttgtaaatgaacacgttacattaataaacacgatgaccgacagtatttca
gaccctgttaccgtagttgaaaagtttggtgtaggccccgagcttattatcgattacttg
gcactaatgggcgataaggtcgataatatcccaggtgttgaaggctgtggtccaaaaacg
gccgttaagtggttagagaaatatggctcgttgcaaggtgtaatggatcacgcaagtgag
attaagggtaaaataggtgaaaagttagctgcagctctcgatcatctgcctttaagctac
gagcttgcaacaattaagtgcgatgttgaagttgaatcagatcttgatacgttcaaacta
caagagccaaataaagacgaattaattgcactatatggtgagtgcgaatttcgtcgttgg
ttagctgagatactagataaccctaaagatgcagaaacacatctagctgtacctaccgaa
gccactgaattaccaaaagtagaagatgcccattacgaaactattttaacgcaagcgcaa
tttgatacgttaatagagcaattaaatagtgccgagttatttgcatttgatacagaaact
accagccttgattacatgaaagcgcaattagtgggtatgagttttgccgtaaaagcgggt
gaagctgtgtatttacctctagcgcatgactacccgggtgcgcctgagcaattaagtctg
gaatttgtaatgcaaaagctaggtccaattttgtccgatgaaaacaaagctaaagtaggg
caaaaccttaaatacgacaaaagtgtattagcgaatgcaggttttgcgctaaacggtatt
aagtttgacaccatgcttgagtcatacgtatttaatagtgtgggtacacgccacgatatg
gactcgctagcacttaaatatctaggtcataaaaatattagctttgaagatattgctggc
aaaggtaaaaagcaacttaccttcaaccaaattgaacttgaaaaagctgcgccttacgct
gcagaagatgccgatattactttgcgcctacatgaagtgctttggccaaaaatagcggct
gatgaaaagctaaaatctgtattcgaagatatagaaatgccacttgttagtgtgatttct
gatattgaacgaaccggcgttgcaatagatagtaatatgcttgcagcgcacagccaacga
ttaggcgagcgtttaattgagcttgaaaaagaagcatttgaaatagcaggcgaaccattt
aatttaagctctcctaagcaactacaagtattgttgtttgaaaagcttggcctgcctatt
atcaaaaaaacacctaaaggtgcaccttctaccgcagaagaagtattgcaagagcttgct
catgattatccactaccgaaagtaattatagagcatcgtggtttatcaaagcttaaatca
acttacaccgataaattaccattaatggtgaatgagaaaacccagcgtgtacatacatct
tatcatcaggcaattacagcaacggggcgcttgagttcaaccgatcctaatttacaaaat
attcctattcgttcagaagaagggcgtcgaattcgtgaagcgtttatagctgcagatggt
tataaaattgtcgctgccgattacagccaaattgagctgcgtattatggcgcacctttca
caagacaaaggtctattaaatgcattcgctaacggcttagatgtacacagtgcaactgcc
gctgaagtatttggtgtagagcttgatgatgtaactaccgatatgcgccgcaaggcaaaa
gcagtaaactttggtttaatttatggtatgtcggcatttggtttagcacgtcaactagat
gtgccacgccatgaagcgcagcattacatagataaatactttgagcgttttcctggtgta
ttagagtacatggaaacaacacgtgaaaaagcggctgaaaatggctacgttgaaacaata
tttggtcgccgcctacatttgccagaaataaacgcacgtaatggcgcgcgcagaaaagga
gccgaacgtgctgctataaacgcaccaatgcaaggtactgctgctgatattatcaaaaag
gcaatgctgagcgttaaccgctgggtacacgaacaagcgccaaatacgattaagttactt
atgcaagtacacgatgaattggtatttgaaattaaaacagactgcgcaccagaatacaca
aaacatatttgtgagctgatgtcgcaagctgcagcgcttgatgtgccgcttattgttgaa
gccgacgaaggtgacaactgggaacaagcccattaa
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