KEGG   Pseudoalteromonas sp. LC2018020214: JG479_02005
Entry
JG479_02005       CDS       T10970                                 
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
pslc  Pseudoalteromonas sp. LC2018020214
Pathway
pslc03030  DNA replication
pslc03430  Mismatch repair
pslc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pslc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JG479_02005 (ssb)
   03430 Mismatch repair
    JG479_02005 (ssb)
   03440 Homologous recombination
    JG479_02005 (ssb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pslc03032]
    JG479_02005 (ssb)
   03400 DNA repair and recombination proteins [BR:pslc03400]
    JG479_02005 (ssb)
   03029 Mitochondrial biogenesis [BR:pslc03029]
    JG479_02005 (ssb)
DNA replication proteins [BR:pslc03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    JG479_02005 (ssb)
DNA repair and recombination proteins [BR:pslc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     JG479_02005 (ssb)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    JG479_02005 (ssb)
Mitochondrial biogenesis [BR:pslc03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    JG479_02005 (ssb)
SSDB
Motif
Pfam: SSB DUF3127 tRNA_anti-codon SSB_1
Other DBs
NCBI-ProteinID: QQM64670
LinkDB
Position
1:450120..450845
AA seq 241 aa
MSRGVNKVILVGNLGQDPEVRYMPNGNGVANITLATSDSYKDKNTGQMVDKTEWHRVVFF
GKLAEIVGEYCRKGSQIYVEGKLQTRKWTDQQGQEKYTTEIVVDGFTGQMQMLGARGGDQ
QSGGYQGNQSQGGQQGGGYQGNQAQSAQQSGGYGQNNQGQNNQQQGGYAPQQQAAPAAQP
QSAPAPQQNNQYQQPQGGFAPQQNSAPQQQGGFAPKPQSAPQGGASNPMEPTIDFDDDIP
F
NT seq 726 nt   +upstreamnt  +downstreamnt
atgagtcgtggggtgaacaaagtaattttggttggtaatttagggcaagatcctgaagtt
cgttatatgcctaacggcaacggtgtagcaaatattaccctagcaacttcggatagctat
aaagataagaacactggccaaatggttgataaaactgagtggcaccgtgttgtatttttt
ggcaagttagctgaaattgttggtgaatattgtcgtaaaggttcacaaatttatgttgaa
ggtaaacttcaaacacgtaagtggaccgatcaacaaggccaagaaaagtacactacagaa
atagtcgtagatggctttactggtcaaatgcaaatgttgggcgcacgtggtggcgatcaa
caaagtggtggttaccaaggtaatcaatcacaaggtgggcaacaaggtggtggttaccaa
ggtaatcaagcgcaaagtgctcaacaaagcggtggttacggccaaaataatcaaggccaa
aataaccagcaacaaggtggttatgctccacaacagcaagcagcacctgcagcgcaacct
cagtcagcgccagcaccacaacaaaataatcaataccaacaaccgcaaggcggctttgca
ccacaacaaaatagtgcaccgcagcagcaaggtggtttcgctcctaaaccacaaagtgct
ccgcaaggtggtgcatcaaacccaatggaaccaaccattgattttgatgacgatatcccg
ttttag

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