Pseudoalteromonas sp. LC2018020214: JG479_02610
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Entry
JG479_02610 CDS
T10970
Symbol
lptD
Name
(GenBank) LPS assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pslc02000
]
JG479_02610 (lptD)
Transporters [BR:
pslc02000
]
Other transporters
Pores ion channels [TC:
1
]
JG479_02610 (lptD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
LptC
Motif
Other DBs
NCBI-ProteinID:
QQM64785
LinkDB
All DBs
Position
1:complement(625675..627927)
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AA seq
750 aa
AA seq
DB search
MSKTWGILMLSVVSAPSLAETELAHNLCGISMQTRAWQPLEGLNLGEVDIQADDVELLGT
QSAEFTGNVDINTLKMSLSAQTALIDKQRGLLNATGPITYQDYVSKVNSTGLNADLNNSE
VSLLGADYSLTEQQGKGGAEKLTVNQSGLLLMNASFTTCPSDTPAWEIEADEINLSREEG
WGETYNAVLRILDTPVLYLPYFTFPLDERRKSGLLTPTISSSDKYGLETITPYYLNIAPN
FDATITPRYMSNKGLQLQTEFRYLTEQHEGLVGIEYLDSDDSEPDLNERYMFHWQQQSYL
GENWRANVDVTNVSDDNYITDLTSNYASKTDTQLYRTGSLTHLGDTWRTDIKVQNFEVLG
DHLESYTAIPQVNFTQTAPWRFDNFDFSVSGEISHFTNDSSEVAIDSATRVHVEPKARYN
YATHAWSFLSEVSLLQTNYKQSGNLTGTQYSDTVSRTIPKVRLYSQLNFERDASYFFEDG
IQTLEPQIQYLYTPNKDQSDIGLFDTTKLQDDYYGLFRDVRFSGVDRIAAANQFTLGATT
RLFDKKQEEVFNFSAGQIFYLSDDAKPTEQGLNSDTNYNALFAAQTMLHWHRRWYLAGGI
QYDTDGKQMVQSNVTLDYKGDNNQLVQLNHRYANDVSGNTIEQAGVFTSIPISDEWQFIA
SYHRDLENNRSIEVLSGLQYESCCWAIQITGHRQIETDLNQSIGQEQATFDSGISLNFVL
KGLGSKSRYDAQKLLQQGIFGYRRPYFLSN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacctggggcatattgatgctaagcgtagttagcgcaccatcgcttgccgaa
actgaactggcacacaacctttgtggcatttcaatgcaaaccagagcttggcaaccactt
gaaggccttaaccttggtgaagttgatatccaagctgatgatgttgagctacttggcact
caaagcgctgaatttaccggcaatgttgatattaacacccttaagatgagtttgtccgca
caaactgcgttgatagacaaacagcgtggtttattaaatgcaacggggccaattacttat
caagactacgtaagtaaagtaaacagcaccggattaaatgccgatttaaataattcagaa
gtcagtttgttaggcgccgactacagcctaaccgaacaacaaggtaaaggcggcgctgaa
aagctcactgttaatcagtctggcctattactcatgaatgcaagctttactacttgccca
agtgacaccccagcatgggaaattgaagctgacgaaataaacctttcacgcgaagaaggc
tggggcgaaacatataacgccgtattgcgtattttagatacaccagttctatatttacct
tattttacattcccgctagatgaacgccgtaaatcgggcttacttaccccgaccatttca
agctctgacaaatacggccttgaaacaattacgccgtactatttaaatattgcacctaac
tttgatgccactattacgcctcgttatatgtctaacaaagggctgcaattacaaacagag
tttagatacctaacagagcaacacgaaggcttagtagggattgaatacttagatagtgat
gattctgagcctgatttgaatgaacgctacatgtttcattggcaacagcaaagctaccta
ggtgaaaactggcgcgcaaacgttgatgtaaccaatgtgagcgatgataactacatcacc
gacttaacttcaaactacgcaagtaaaaccgatactcaattgtatcgtactggttcactt
acccatttaggtgatacatggcgcaccgatattaaagtgcaaaactttgaagtactcggc
gatcacttagagtcatacactgcaataccacaagttaattttacgcaaacagcgccttgg
cgttttgataattttgactttagtgtgtcgggcgagattagtcattttactaatgattca
tcagaagtggccatagacagcgcaactcgtgtacacgtagagccaaaagcacgctacaac
tacgctacgcatgcgtggtcttttttgtctgaagtgagcttattacaaacaaattataag
caaagcggaaacttaaccggcacgcaatatagcgataccgtatcgcgtactatcccaaaa
gtacgtttgtactctcagcttaactttgagcgtgacgcatcttacttttttgaagatggt
atacaaacactagagccgcaaattcagtatttatatacacctaataaagatcagtcagat
attggcttgtttgatacaaccaaactgcaagatgattattatggtttatttagagacgtg
cgcttttcgggtgttgaccgtatagcagctgctaatcagtttactttaggtgctacaacg
cgcttatttgataaaaaacaagaagaagtgtttaactttagtgcgggccaaatattttat
ttaagtgacgatgctaagccaacagagcaaggcttaaactcagacactaattataatgca
ctatttgcagctcaaaccatgttacattggcaccgccgttggtacctcgctggaggtatt
caatacgatacagatggcaagcaaatggtacagtcaaatgtaacgcttgattataaaggt
gataataatcagctagtacaattgaaccatcgctatgcaaatgatgtctcaggaaataca
atcgagcaagcaggtgtatttacaagtattcctattagcgacgaatggcaatttattgcg
agctatcatcgagatcttgaaaacaacagaagtatcgaagtattgagcggattacagtat
gaatcatgctgttgggctatccaaattactggccatcgccaaattgaaactgatttaaat
cagtcaataggacaagaacaagcaacttttgattcaggtattagtttgaattttgtatta
aaaggacttggcagtaaaagccgttatgatgcacaaaaattattacaacaaggtattttt
ggctatcgtagaccgtattttcttagtaactag
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