Pseudoalteromonas sp. LC2018020214: JG479_02780
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Entry
JG479_02780 CDS
T10970
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JG479_02780 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pslc03019
]
JG479_02780 (orn)
03009 Ribosome biogenesis [BR:
pslc03009
]
JG479_02780 (orn)
Messenger RNA biogenesis [BR:
pslc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JG479_02780 (orn)
Ribosome biogenesis [BR:
pslc03009
]
Eukaryotic type
Pre-60S particles
RNases
JG479_02780 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QQM64816
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All DBs
Position
1:660793..661338
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AA seq
181 aa
AA seq
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MTINKSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQSDELLNGMDE
WCTTQHGKSGLTARCKASTFDEEYAVAQTLDFLKQWVPAGVSPMCGNSIGQDRRFMNKYM
RELEDFFHYRNLDVSTIKELARRWKPEVLAKVNKKGSHLALDDIKDSIMELKVYRENFFN
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgactattaataaatcaaatttaatttggctcgatcttgaaatgacaggactcgaacca
gagaccgataaaatactcgaaattgcgacggttgtcactgacgcagacctgaatatatta
gctgaagggccaaccatagctattcatcaaagtgatgaattactaaatggtatggacgag
tggtgtactacgcagcatggtaagtcgggtttaacagcgcgctgtaaagcaagtacattc
gatgaagagtatgccgtggcacaaacgttagattttttaaaacagtgggtgcctgcaggt
gtatcaccaatgtgtggtaattcaattgggcaagaccgccgctttatgaataaatacatg
cgtgaacttgaagatttttttcattatcgcaatcttgacgtgagtactattaaagaatta
gcacgtcgctggaaacccgaagtgcttgcaaaagtgaacaaaaaaggttcgcaccttgct
ttggatgatattaaagattcgattatggaattaaaagtctatagagaaaatttctttaat
ttgtaa
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