Pseudoalteromonas sp. LC2018020214: JG479_03330
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Entry
JG479_03330 CDS
T10970
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc00260
Glycine, serine and threonine metabolism
pslc00630
Glyoxylate and dicarboxylate metabolism
pslc00670
One carbon pool by folate
pslc00785
Lipoic acid metabolism
pslc01100
Metabolic pathways
pslc01110
Biosynthesis of secondary metabolites
pslc01200
Carbon metabolism
Module
pslc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JG479_03330 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JG479_03330 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JG479_03330 (gcvP)
00670 One carbon pool by folate
JG479_03330 (gcvP)
Enzymes [BR:
pslc01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
JG479_03330 (gcvP)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Pyridoxal_deC
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QQM64916
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Position
1:762121..765012
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AA seq
963 aa
AA seq
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MSNAKSLEELEQKQDFIRRHIGPSPAQVSDMLSALEVSSVQELIDQTVPASIRLEQPLTV
GQSRTEVETLSYLKSVASKNKVFKSYIGQGYHPTNVPHVILRNVLENPGWYTAYTPYQPE
IAQGRLESLLNFQTMTLDLTGLDLASASLLDESTAAAEAMGLAKRVSKAKKANAFFIADD
VHTQTIDVVTTRAEQFGFEIIVGKAEDAVNHDIFGALFQYPTTSGEVVDITDLIAGVQSK
KAIACVAADIMSLLLLKAPGKLGADVVLGSAQRFGVPMGYGGPHAAFFATRDAYKRSLPG
RIIGVSKDRLGNDALRMAMQTREQHIRRDKANSNICTAQVLLANMAAFYAVYHGPQGLKT
IAQRIHRFADILASGLKAKGIALKHSTWFDTLTVVSDNKDDVIARAIAKGVNFATNHEGE
YSISVSETTTRADITELFDIILGEGHGLSVDAIAADVEANGSESIPASLVRDDEVLTHPN
FNSYHSETDMLRYIKRLESKDLSLNHSMISLGSCTMKLNATAEMIPITWPEFANLHPFCP
LDQAEGYQIMIGELHDWLVNITGYDAVSLQPNSGAQGEYAGLIAIRKYHESRGDAHRNVC
LIPSSAHGTNPASAQMASMKIVVVNCDKNGNVDMADLKTKAEEVSENLSCIMITYPSTHG
VYEETIREICDIIHEHGGQVYMDGANMNAQVGVTSPGFIGSDVSHLNLHKTFCIPHGGGG
PGVGPIGVKSHLAPFMPNHSVINVPGTNIGNGAVSAAPYGSAAILPISWAYITMMGSEGL
KQATEMAIVNANYLTHELSKHFPILYRGRNNRVAHECIVDLRPLKEQSGITEMDVAKRLQ
DYGFHSPTMSFPVAGTLMIEPTESESKGEIDRFIEAMVSIKGEIEKVISGEWSIENNPLV
FAPHTQGDVLGNEWDRAYDRFYAAFPVPAVAKNKFWPTVTRIDDVYGDRNLVCSCPAVET
YRD
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgccaaatctcttgaagaactagagcaaaagcaagattttattcgccgccat
attgggccaagcccagcacaagtaagcgatatgctaagtgctttagaagtatcgagtgtg
caagagctcattgaccaaactgtaccggctagcattcgtctagagcaaccgctaacagtt
ggacaaagccgtactgaagttgaaacactaagctacttaaaatcagtagcaagcaaaaat
aaagttttcaaatcgtacattggccaaggctaccacccaactaacgtaccgcacgtaatt
ttacgtaacgtactagaaaatccaggttggtatacagcgtacacaccgtatcagccagag
attgcacaagggcgtttagaatcattattaaacttccagactatgaccctagatttaact
ggtcttgatttagcaagtgcatcactacttgacgaatcaacagccgctgcagaggctatg
ggccttgcaaaacgcgtatcaaaagctaaaaaagcaaatgccttttttattgccgacgac
gtacatacacaaacaatcgacgtagtaacaacgcgtgccgagcagtttggttttgaaata
attgtaggtaaagcagaagatgccgtaaaccacgacatttttggcgcattgttccaatac
ccaactacatcaggcgaagtggtagacataactgacctaattgctggcgtacaaagcaaa
aaggccattgcctgtgttgctgccgacataatgagcttattactattaaaagcaccgggt
aaactaggcgcagacgtagtacttggttcggctcaacgttttggcgtacctatgggttac
ggcggcccacacgctgcattttttgcaacacgtgacgcatacaaacgttcattaccaggt
cgtattattggtgtatctaaagaccgtttaggtaacgacgcactacgtatggcaatgcaa
acgcgcgaacaacacattcgccgcgacaaagccaactcaaacatttgtacagcacaagta
ttacttgccaacatggcagcgttttacgcggtgtaccacggcccacaaggcttaaaaact
atcgcgcagcgtatacatcgctttgctgatattttagcaagtggcctaaaagctaaaggc
atcgcacttaagcacagcacttggtttgatacgctaacagtagtaagcgacaacaaagac
gacgtaatagcgcgtgcaattgcaaaaggcgtaaactttgcaacaaaccacgaaggcgag
tactcaatttcggtatcagagacaacaacacgcgccgatattactgagttattcgatatt
attttaggcgaaggccatggcctaagtgttgacgctattgcagcagacgttgaagcaaat
ggcagcgagtcaattcctgcaagtttagtacgtgatgacgaagtactaacgcatccaaac
tttaacagctaccacagcgaaacagacatgcttcgctacattaagcgactagaaagcaaa
gacttatcgcttaatcactcaatgatctcgttaggctcatgtaccatgaaactaaacgcg
actgctgagatgatcccaattacgtggcctgagtttgcaaaccttcacccattctgcccg
ctggatcaagcagagggttaccaaataatgattggcgagctacacgactggcttgtaaac
attaccggttacgatgcagtatcacttcagccaaactctggtgcacaaggtgaatacgca
ggcttaatcgcgattcgtaaataccacgagtcacgcggcgatgcacaccgtaatgtatgt
ttaatcccaagctctgcgcacggtactaaccctgcatcagcccaaatggcgagcatgaaa
attgtggtagttaactgcgacaaaaacggtaacgtagacatggcagaccttaaaacgaaa
gctgaggaagtgtctgaaaacttatcgtgcatcatgatcacatacccgtctacgcacggt
gtttacgaagaaacaattcgtgaaatttgtgacattattcatgagcacggcggccaagtt
tacatggacggcgctaacatgaacgcgcaagttggcgtaacaagcccaggctttattggc
tcagacgtatcgcacttaaacttgcataaaacgttttgtattccacacggcggcggtggt
ccaggtgttggcccaattggtgttaaatcgcaccttgcgccatttatgccaaaccacagc
gtaattaacgtaccaggtactaacattggtaacggtgcggtttcggcagcgccttatggc
tcagctgctattttacctatttcatgggcttacattaccatgatgggttcagagggctta
aaacaagctactgaaatggccattgttaatgctaactacttaacgcatgagctaagcaag
cacttcccaattttataccgtggtcgtaacaaccgtgttgctcacgaatgtattgttgac
ttacgcccgcttaaagagcaatcaggcattactgaaatggacgtagctaagcgcttgcaa
gactacggcttccattcaccaactatgtcgttcccagtagctggcacattaatgattgag
ccaacagagtctgaatcaaaaggtgagattgaccgctttatcgaagcaatggtgtcaatt
aaaggcgaaattgaaaaagtaatctctggcgaatggtcaatcgaaaacaacccgctagtg
tttgcaccgcatacacaaggcgacgtattaggtaacgaatgggaccgcgcatacgaccgt
ttttacgctgcattcccagtgcctgcagtggctaaaaacaagttttggccaaccgttaca
cgtattgatgacgtgtacggcgaccgtaacttagtgtgttcatgccctgcggtagagact
tatcgcgactaa
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