Pseudoalteromonas sp. LC2018020214: JG479_05275
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Entry
JG479_05275 CDS
T10970
Symbol
cydC
Name
(GenBank) thiol reductant ABC exporter subunit CydC
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JG479_05275 (cydC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pslc02000
]
JG479_05275 (cydC)
Transporters [BR:
pslc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
JG479_05275 (cydC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
RsgA_GTPase
AAA_22
MMR_HSR1
AAA_29
AAA_23
Clathrin-link
nSTAND1
DNA_pol3_alpha
AAA_16
nSTAND3
FeoB_N
DUF87
NACHT
Pex24p
AAA_30
Dynamin_N
MobB
Motif
Other DBs
NCBI-ProteinID:
QQM65288
LinkDB
All DBs
Position
1:complement(1205822..1207567)
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AA seq
581 aa
AA seq
DB search
MRNFIRLLKLCAPHYKAMLLGTFLATITVLANVGLLAISGWFLASMAAAGIAGVQMNYFT
PAGTIRFLAIVRTASRYGERLVTHNATFLLLSEIRTNVFATLSKLNNVDLAMSRSADLVN
RLQNDVDALDKFYLNVLLPMLVALLSVPIIMLFMSAYNGNVALICFTGIILIGVVIPALL
SIKLTKNSHKETQLSAQLRSELSDTLTGLRELSIYQARSQQLNKCDELSEQYNQQLFIRH
KALANSDGLSLLVVQLAMLASVVTIVPLVYASSMVNVELAMLSLFVLASFESVLLLPNAF
IELPSVLKAAERLFTLEDKAASTQIESKHVDIDENFSAQNHKLVLNNISYQYGEQTALTN
ISFELMPQQKVAIVGRSGSGKTTLVNLLTGLWPLQQGSITLNNQNSVVDLHSLNNDIRAN
VINILAQQHHIFDGTLSENLRYAAPNATKEQMIEALALAQLSPWFNELKEGLKTRLGTGG
RNVSQGQSRRIAIAQALLKNPAILVLDEPTEGLDNQSKQGVMQAIMHVMDNASVLTITHD
PALLAQMDNVVWLEGGKVVAQGSHKELSNTYPDYVALTTRF
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaattttattcgcttactaaagctttgtgctcctcattataaagctatgctattg
ggtacatttttagcgacgattacggtattagctaatgtgggcctgttggctatatctggc
tggtttttagcatcaatggccgctgctggtattgcgggcgtacaaatgaattattttact
cctgccggcacgattcgttttttagcaattgtgcgaacagcatcgcgctatggcgaacga
ctagttactcataacgccacgtttttattactaagtgaaatacgtaccaatgtatttgca
acgttaagcaagcttaacaatgttgatttagcaatgagccgcagcgctgatctagttaac
cgattacaaaacgatgtagacgcactcgacaaattttatttaaacgttttacttcctatg
ctggtcgctcttttaagtgtgccaatcatcatgctgtttatgtcggcctataatggcaac
gtcgcccttatttgctttactggcattatacttattggtgtggttatacctgccctactc
agcataaagctcactaaaaacagccataaagaaacacaacttagtgcacaacttcgctct
gagctttcagatacacttacaggccttagagagcttagtatttatcaagcccgttcgcag
caacttaataagtgcgacgaattaagcgagcagtacaatcagcaattatttattcgccac
aaagcactggcaaactcagatggattaagcttgttggttgttcaattagccatgcttgct
agcgtagtaaccattgtgccgctggtttacgcaagcagtatggtaaatgtagaacttgct
atgttaagtttatttgtactggcaagctttgaaagcgtattactactacccaacgcgttt
atagagcttccgagtgttttaaaagcagcagagcgattgtttacacttgaagataaagca
gctagtacgcaaattgaaagtaaacatgtagacattgatgaaaactttagcgcgcaaaat
cacaagttagtacttaacaatattagctaccaatatggtgaacaaacagcgctaactaat
atcagttttgaactaatgcctcagcaaaaagtagcgattgtaggtagaagcggcagcggt
aaaacgacgcttgtaaatttacttactggtttatggcctttgcaacaaggcagcataacg
ctaaacaatcaaaatagcgttgttgacttacattcgttaaataatgatatacgcgcaaat
gttataaatatactcgcccagcagcaccatatttttgatggcacattaagtgaaaactta
cgttatgccgcgccaaatgcaactaaagagcaaatgattgaagcgctcgcattagctcaa
ttgagcccatggtttaatgagctaaaagaaggtttaaaaacacgtttaggcactggcggg
cgtaacgtgtcgcaaggccaatctaggcgtatagccattgcccaagcattacttaaaaac
cctgctattttagtacttgatgaaccaactgagggtcttgataatcaatctaagcaaggg
gtaatgcaagcaataatgcatgttatggataacgcgagcgtgctgacaattacgcacgat
cccgctctacttgctcaaatggataatgttgtatggttagaaggcggtaaagtagtcgca
caaggctctcataaagagctcagtaacacttatcccgactatgttgcgctaactacccgg
ttttaa
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