Pseudoalteromonas sp. LC2018020214: JG479_06210
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Entry
JG479_06210 CDS
T10970
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc03440
Homologous recombination
Brite
Enzymes [BR:
pslc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JG479_06210 (recB)
DNA repair and recombination proteins [BR:
pslc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JG479_06210 (recB)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QQM65397
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Position
1:1404187..1407765
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AA seq
1192 aa
AA seq
DB search
MQALNPLTMPLIGQSLIEASAGTGKTYTITGLYLRYLLGMQIEGELNTPLSVEQILVVTF
TDAATQEIKDRVRSRIIAARDALLGQDPNDELIEGVIAKIDDKHRAFDLLDAAAKSMDEA
AIFTIHGFCQRMLKQHAFESGVAFNLEFILDERDILLETIKDFWRAFVYPLNKERTDAIL
DVFAAPESLFAQVASILNKANAHITPQINLDDVWKARDEYITRVPAFKKAVLEQEFIGAI
KGSGLSGSKTPARKSSLGALEAFCLGGDLFFEFGTSKYSFEVWSTENLSDVSNYKKNQPL
FVHPLLSQFDELAALNNTINQGLKIAVVQHAARWVKAAIVKRKQEQSVITPDDLLTNLHS
ALNNEQGDVLAQKIAQLFPVAMIDEFQDTDPIQYGIFSKIYGQQNTTLAMIGDPKQAIYG
FRGADIFTYIGAKEAVQTDQQFTLGTNFRSSTDIVNSVNSLFGKHANSFIYNDAIPFNAV
AAKGKKAEDSFLIDGKAATAFEFNVFVDEAADEKNKPTNKGVGQAHLATHFANKIVTLLE
KAKQGDACIGSNPVSAADICILVRDRVEAQIMKKALDDAKISSVYLSRESVFSQELSHHL
LNFLTALHGQYDESLLRGVLAGPLFCLSYNEIHALADDENKWQDYLNFFAQLSHIWNKQG
AMAMLERLMSHNQLSAKWQGLGYNVERWLTDFRHLGEILQQKQIELEGTLRLLRWFAQKV
SQQDGETVQVRLESDANLVKIVTMHASKGLEYPLVFMPFASGYRETKEALYHNNGKLVFD
LSKDEDALQKAEQERLAEDLRLLYVALTRAVHFCALGVYNIGQGQSSRLAMQSSALGHVL
FAGLELASSQTWRTHLSEFCDANSAMSYQRFTSQTLLEQGTLCFNNSESAQQTLSVNKVT
ANIERNWRATSFSALSFKKHSDQLAPGRSDEDHEKDEFAVQEDELPSPYSFPKGAKPGSC
LHEIFEQIDFTSPIVHPTNTEQNLSEVVKRSLEKYHIGEQWREVAEKWVLDVLACPLDHS
SLENGLLSLGVLTPKDCLVEMEFNLPLESLSAPKLNEMLIKHFGFTQSKLEFSHVKGLLK
GFVDLIFCYQGKYYILDYKSNYLGSTPADYEGDMLEQAMSSHQYHLQYLIYTVALHRLLK
QRIADYSIETHLGGVYYTFLRGMPAGQGVYFKKLTEEQVIILDGLFSQGAML
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgcttaatcctcttactatgccgctcattggtcaaagtttaatagaagccagt
gcgggtactggtaaaacttatacaattacggggctgtatttacgttacttactaggtatg
caaatagaaggtgagttaaatacgccgctcagtgttgagcaaattttggtagtaaccttt
accgacgccgccactcaagaaattaaagaccgcgtacgtagccgaattattgctgcgcgc
gacgcattgcttgggcaagacccaaacgacgaactcattgaaggcgtaattgccaaaatt
gatgataagcaccgcgcgtttgatttactcgatgcagctgctaaatcaatggacgaagcc
gctatttttactattcatggcttttgtcagcggatgctaaagcaacatgcgtttgagtcg
ggtgtggcgtttaatctcgaatttattttagatgagcgcgacatattactcgaaactatt
aaagatttttggcgtgcgtttgtatacccacttaataaagaacgcaccgatgctatttta
gatgtatttgccgcaccagagtctttatttgctcaagtggcgagcattttaaacaaagct
aatgcgcacattacaccacaaataaatttagatgatgtatggaaagcccgtgacgagtac
ataacccgtgtgcctgcatttaaaaaagcggtgttagagcaagagtttatcggtgctatt
aaaggctcgggtttaagcgggtccaaaacgccagcacgaaaaagcagcctgggtgcgctt
gaagcattttgtttaggcggcgatttgttttttgaatttggcactagcaagtattcgttt
gaagtgtggagtacagaaaacttaagcgatgtgagcaattataaaaaaaatcagccatta
tttgtgcatccattactgagtcagtttgacgagcttgccgcccttaacaacaccataaac
caagggctcaaaatagccgttgtacaacatgcagcacgctgggtaaaagccgcaatagtt
aagcgtaaacaagagcaaagcgttatcaccccagatgacttattgaccaatttacacagt
gcgcttaataacgagcaaggcgacgtactagcgcaaaaaattgcgcagttatttccggtt
gccatgattgatgaattccaagataccgatccgattcagtacggtatttttagtaaaatt
tatgggcaacaaaataccacgcttgccatgataggcgaccccaagcaggctatttatggc
tttaggggcgcggatatttttacgtatattggcgcaaaagaagctgtacagactgatcag
caatttacgctgggtactaactttcgctcaagcaccgatatagtcaatagcgttaatagt
ttatttggcaaacacgctaacagctttatttataacgacgccatcccctttaacgcagta
gctgctaaaggtaaaaaagcggaagactcttttttaattgatggcaaagccgcgaccgca
ttcgaatttaatgtatttgtggatgaagccgccgatgaaaagaacaaaccaactaacaaa
ggtgtagggcaagcgcatttagccactcactttgctaataaaatagtcaccctgcttgaa
aaagcaaaacagggggacgcgtgcattggcagtaaccctgtaagcgctgccgatatttgt
atattagtgcgcgaccgtgttgaagcgcaaataatgaaaaaagcgctagatgatgccaaa
atttccagtgtgtatttatcgcgagaaagcgtttttagccaagagcttagccatcaccta
cttaactttttaacagcgctgcatggtcaatatgacgagtcattactgcgcggtgtttta
gcgggtccgctattttgtttaagttataacgaaatacatgcactcgctgatgatgaaaat
aaatggcaagactacttaaacttttttgcacaacttagccacatttggaacaagcaaggc
gctatggcaatgcttgagcgtttaatgagccataaccagcttagcgctaaatggcaaggg
ctgggatataacgttgagcgttggctgacagactttaggcacttgggcgaaatacttcag
caaaaacaaatagagcttgaaggtacgctacgtttactgcgatggtttgcacaaaaggta
agccaacaagacggtgaaacagtacaagtacgcctagaaagtgacgcgaacctagttaaa
attgtcactatgcatgcctcaaaggggcttgaataccctttggtatttatgccgtttgcc
agtggctatcgcgaaacaaaagaagcgctttatcataataatggcaagctagttttcgat
ttaagtaaagacgaagatgcccttcaaaaagcagaacaagaacgcctagctgaagattta
cgcctgctttatgtagcacttactcgcgccgtacatttttgtgcgcttggtgtttataac
attgggcaaggacaaagtagccgcttggctatgcaaagtagtgcacttgggcatgtttta
tttgcagggcttgaacttgccagtagccaaacatggcgcacgcatttaagtgagttttgc
gacgctaacagcgcgatgagctatcagcgatttacctcacaaacattattagagcaggga
acactttgttttaataacagtgaaagcgcgcagcaaacgttaagtgttaataaagtaaca
gcaaatattgagcgtaactggcgagcaaccagctttagtgcgttgagctttaaaaagcac
agcgaccaattagccccagggcgaagtgatgaagaccacgaaaaagacgagtttgcagtg
caagaggacgaactaccatcaccttatagttttcctaaaggggcaaagcccggtagctgt
ttacacgaaatatttgaacaaatagattttactagcccaatagttcacccaactaatact
gagcaaaacttatctgaagtagttaagcgcagccttgaaaagtaccacataggtgagcaa
tggcgagaagtggctgaaaagtgggtacttgatgttcttgcgtgccccctagatcacagc
tctttagaaaacgggcttctttcattgggtgtgcttacacccaaagattgcctagtcgaa
atggaatttaatttacctcttgagagtttaagcgcacctaagctaaacgaaatgctaatt
aaacattttggctttacgcaaagtaagcttgaattttcgcacgtaaagggcttgttaaaa
ggctttgtcgatttaatattttgctaccaaggcaaatattatattttagattataagtct
aattatttaggcagtacgccagctgattacgaaggcgatatgcttgagcaagcgatgagc
agtcatcagtatcatttacagtatttaatttacaccgtagcactgcatcgtttattaaaa
caacgcatagctgattactcaatagaaacccatttaggcggcgtgtattacacgttttta
cgtgggatgcccgcagggcaaggcgtgtactttaaaaagctaactgaagaacaagtgatt
attttagatggcttatttagccaaggagccatgctatga
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integrated database retrieval system
