Pseudoalteromonas sp. LC2018020214: JG479_07365
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Entry
JG479_07365 CDS
T10970
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pslc02000
]
JG479_07365
Transporters [BR:
pslc02000
]
Other transporters
Pores ion channels [TC:
1
]
JG479_07365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
CooC_C
DUF5793
DUF6588
Motif
Other DBs
NCBI-ProteinID:
QQM65620
LinkDB
All DBs
Position
1:complement(1674298..1676667)
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AA seq
789 aa
AA seq
DB search
MTKLTLISSAIFSVLCSQSALAATVTGKVMDDKNQPIKNASIHVHGKNQSVKSNDLGEFA
IEIDANSQLHISKDNYVDSRIAVSESSNNLSVSLKPTSVETVVVYASALHKNSLEMISPV
SVLSGDELRNKSKPTLGETLKGLPGVNASYFGPVSSSPIIRGLDGPRVKITQNGLDASDA
SRIGPDHATSSDSLAAEQIEVLRGPSTLLYGSGAIGGVVNVVDNRIPTDNIDELTGAAEY
SHDTVSNSNTVAAKLETGNEGFNFHFDGTKRSGDDYQTPTFTIADDDGDVETENSVENTF
IDSETLNFGTSYVGDHLTIGFSYGSIDTDYGIPGHEHHHDHEGETEEEHAEHEDEAAEEP
VYAHLEQDRWQGLVSYALHNNWIETINLRVGYTDYSHSEIEDGEIGTTFKNKTTEARLNV
EHKFADWHGMMGYHYSDSDYDAIGEEAFTPASVTTTNALYLLEEREFGDVTIELGARVED
YKIESQITAHEHSHDEVEIDHSDEETIGYNESFTNLSASAGAIWQYKPGHSIATSISHSE
RAPLSAELLSNGLHIATGTYELGLGYNIEDNEAHFEPENIKQETSTNLDLSFRRFSGDFG
YTVNFFYNDIKNFYFQENTGLVYDEEDGLESAIGAHDDAVAVYQFTSKDAELYGIEFDAH
YQVTPSAMVKVFGDSTRAKLKDDEGNLPRIPANKLGSELQYDLGDLQLTLTGTHYFDQND
VTAFETQTDGYTLFDAQANYQLGLGSVDAQLYINVDNITDELGFVHSSFIKDKAPLPGRN
FRFGVRGYF
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagttaacattaatctcctctgctattttttctgttttatgttctcaatcagct
ttggctgccactgttactggtaaagtaatggatgataaaaatcaaccaattaaaaatgcc
tcaattcatgtgcatggtaaaaaccaaagcgttaaaagtaatgatttaggcgaatttgct
atagaaatcgatgcaaatagccaattacatattagtaaagacaactacgtagactctcgt
attgctgttagcgaatcttcaaataatctgtctgtgtcacttaaaccaacatcggttgag
acagtggttgtttatgcctctgcacttcataaaaatagcctcgagatgatatcgccagta
agcgtgctctcaggtgatgaattaagaaataaatcaaaaccaactcttggtgaaactcta
aaaggtttaccaggcgtaaatgcaagttactttggccctgtatcatcaagcccaattatt
cgtggtttagatggccctcgcgttaaaatcacacaaaacggattagatgccagcgatgca
tcacgcattggcccagaccacgcaacatcaagcgacagcctagcagcagaacaaattgaa
gtattacgtggcccaagtaccctactttatggctctggtgcaattggcggtgttgttaac
gtggttgataaccgcatccctacagacaatatcgacgagcttacgggtgctgctgaatac
agccacgatacagtgtcaaactcaaacacagtagctgcaaaacttgaaacaggtaatgaa
ggctttaactttcattttgatggcactaagcgcagtggcgatgattaccaaacacctacc
tttactattgccgacgatgatggcgatgtagaaacagagaattctgtagaaaacacattt
attgatagcgaaacacttaactttggtaccagctatgttggcgatcatttaacgattggt
ttttcgtacggtagtattgataccgattacggtattcctgggcatgagcatcatcacgat
cacgaaggtgaaactgaagaagagcatgcagaacatgaagacgaagcagctgaagagccg
gtttacgcacatttagagcaagatcgttggcaagggcttgtaagttacgcccttcataat
aactggattgaaaccatcaacctacgtgttggctacacagattactcgcacagcgaaatt
gaagatggcgaaattggtactacttttaaaaataaaacgactgaagcacgtttaaatgta
gagcataagtttgctgattggcacggaatgatgggctatcactacagcgattctgactac
gatgcaattggtgaagaagcctttacacccgcaagtgtaactacaactaacgcattatat
ttactagaagagcgtgaatttggcgacgttacaattgaacttggcgcacgtgttgaagat
tacaaaattgaaagccaaatcacggcacacgagcatagccacgatgaagtagaaatagat
cacagcgacgaagaaaccattgggtataatgaaagttttaccaatttaagtgcctctgct
ggtgccatttggcaatacaagccgggtcatagtatcgctacgagtatttctcattcagaa
cgagcaccgctttcggcagaacttttatctaacggtttacacattgcaactggcacgtac
gagctaggccttggttacaatattgaagataatgaagcgcattttgagccagaaaatatc
aagcaggaaacttcaacaaacttagatttaagctttagacgctttagcggtgattttggc
tacaccgttaactttttctataacgatatcaaaaacttttattttcaagaaaatacgggt
ttagtttacgatgaagaagatggtttagaatcagctattggtgcacatgacgatgctgtt
gcggtttatcagtttacaagtaaagacgcagagctttatggaattgagtttgacgcgcat
taccaagtaacaccaagcgctatggttaaagtatttggtgactcaactcgtgcaaaacta
aaagacgacgaaggtaatttaccacgtatccctgctaataaattaggctctgagttacag
tacgatttaggtgacttacaactaacattaacgggtactcattactttgatcaaaacgat
gtaactgcctttgaaactcaaactgatggctatacgttatttgatgcacaagctaattac
caattaggtttaggcagtgtcgatgcacagctgtatataaacgttgataacattactgat
gagttaggttttgtacatagctcatttattaaagataaagcaccactacctggcagaaac
ttccgctttggtgttcgtggctatttttaa
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