Pseudoalteromonas sp. LC2018020214: JG479_08210
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Entry
JG479_08210 CDS
T10970
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pslc02000
]
JG479_08210
Transporters [BR:
pslc02000
]
Other transporters
Pores ion channels [TC:
1
]
JG479_08210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl
OmpA_membrane
Porin_4
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
QQM62757
LinkDB
All DBs
Position
1:1852226..1852795
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AA seq
189 aa
AA seq
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MIKTLSLSAIALATLGFNSAAHADISDFDSPRIYTGIGYGQYSFEFEDSDNDTDFDDDAQ
MLKGYIGTQFNEYLSLELAYQNFDEVSDIDSKAEIDGVSLAARLGYPITESFSVYAKGGW
LEWDADYTQDLPVGGVTASTDGGDAFYGAGIEYALTTNVQFRLEYERYKLDDDIDPDMDV
ASVSVQYMF
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaacactttctctttcagctattgcactagcaacactgggttttaactctgca
gcacacgctgacatttctgatttcgattctccacgtatttatactggtatcggttacggt
caatattcttttgaatttgaagacagtgacaacgacactgactttgacgacgatgcacaa
atgcttaaaggctatattggtactcagtttaacgaatacctaagcttagaacttgcttat
caaaactttgatgaagtaagtgatatagacagcaaagctgaaattgatggcgtatcgctt
gccgcacgtttgggctacccaataacagaaagcttttcggtatatgcaaaaggcggttgg
cttgagtgggatgcagattacacacaagatttaccagtaggtggtgtaacagcgtctaca
gatggtggtgatgcattttacggtgcgggtattgaatacgcacttacaacaaatgtacag
tttcgtttagagtacgaacgctacaaacttgatgacgatattgatccagacatggatgta
gcatctgtatcagttcaatacatgttttaa
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