Pseudoalteromonas sp. LC2018020214: JG479_08395
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Entry
JG479_08395 CDS
T10970
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc00541
Biosynthesis of various nucleotide sugars
pslc01100
Metabolic pathways
pslc01250
Biosynthesis of nucleotide sugars
Module
pslc_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JG479_08395 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pslc01005
]
JG479_08395 (kdsB)
Enzymes [BR:
pslc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
JG479_08395 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pslc01005
]
Lipid A
JG479_08395 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Dmd
DUF4712
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
QQM62793
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Position
1:complement(1895042..1895803)
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AA seq
253 aa
AA seq
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MEFVVVIPARFASTRLPGKPLADICGKPMVQHVYEKACLSGASKVVIATDHQKVFDAVSM
FTNDVVMTREDHQSGTERLAEVVDFLKLDSNTIVVNVQGDEPLLAPENVSQVAALLSDST
APMATLSVAIEERDEVFNPNAVKVVSDINKNALYFSRASIPFDRNTMMDDSTALNLAPFQ
RHVGIYAYRAGFIKQYIELSVSPLELLESLEQLRVLYHGYKIKIEQAQIAPHAGVDTPDD
LAKVIAHIKSKNV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtggaattcgtagttgtaattcctgctcgttttgcatcgacccgactaccaggtaaaccg
cttgctgatatttgtggcaagccaatggttcaacacgtttacgaaaaagcatgtttatca
ggtgctagtaaagtagttatagcaaccgatcatcaaaaagtatttgatgcagtaagtatg
tttactaatgatgtagtaatgacgcgtgaagatcaccagtcgggtactgaacgattagct
gaagtggttgatttccttaaacttgatagcaatacaattgtggttaatgtacaaggcgat
gagccactacttgcaccagaaaacgtatcccaagttgctgcactattaagtgattcaaca
gcaccaatggcaacgttaagtgttgctattgaagaacgtgatgaagtatttaatcctaat
gccgttaaagtggttagcgatataaataaaaatgccctgtatttctctcgtgcaagtata
ccgtttgatagaaatacgatgatggatgatagcactgcccttaatttagccccgtttcaa
cgccatgtaggtatttatgcgtacagagcgggttttattaaacaatatatagagctgagt
gtatcaccactagaattacttgaatcacttgagcagttacgtgttttgtatcacggttat
aaaattaaaatagaacaagctcaaatagcccctcatgcaggtgtagatacgcctgatgac
ttagctaaagtgatagcgcatattaaaagtaaaaacgtgtga
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