Pseudoalteromonas sp. LC2018020214: JG479_08410
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Entry
JG479_08410 CDS
T10970
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JG479_08410 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pslc02000
]
JG479_08410 (msbA)
Enzymes [BR:
pslc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JG479_08410 (msbA)
Transporters [BR:
pslc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JG479_08410 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_29
ABC_ATPase
AAA_16
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QQM62796
LinkDB
All DBs
Position
1:complement(1896955..1898700)
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AA seq
581 aa
AA seq
DB search
MDQSTAQIYKRLVSYVGAYKSVAFIAIVGMIGYSAMDALFIQLMKPFIDQGLNQRNTEVL
KYAPFVVIALVLGRGVFNFMSSYCLSYVGSQVVRSLRQELFEHILHLPVSFHDKNSTGDL
ISKITFDTEQVQQAITKALLIVVREGAFVVFLLGVMFYTSWKLSLIFLVIIPLVAIIVAV
VSKRFRHISKSIQSAMGQVTRSSEQMLSGHKVIHGFGGQDQEINHFSKINNHNRQQRIKM
DATKALSVSIIQILAASAMAVILWAVSLPSMIDTITSGDFMALIASMMMLLRPLKQLANV
NSDMQRGISAAQSIFLVLDEEMEKDTGTVSVDKVKGLIEVKNVTFKYPTKDEAVLNDLSL
TIKAGESIALVGRSGSGKSTISNLLPRYYDLELPSEILLDGIALQDYKLTDLRRQFALVS
QQVVLFNDTIANNICYGIKHDVSEKELEQVAKQAHVWEFVKDLPEQLNTMVGENGVMLSG
GQRQRIAIARAILKDAPILILDEATSALDTESEKLIQQALETLMKDKTSIVIAHRLSTIE
NSDRIYVIDNGRVIESGDHNSLLANDGTYSALCKMQFGDQA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagtactgcacaaatttataaacgtcttgtctcgtatgttggcgcatacaaa
agcgtcgcttttatcgcaattgttgggatgataggctattcagcaatggatgctttattc
attcaattaatgaagccgtttattgatcaaggtttaaaccagcgaaatacagaagtttta
aagtacgctccttttgtcgttatcgcgttagtactagggcgtggtgtttttaactttatg
tcttcgtactgtttaagttatgtgggctctcaagttgtacgctctttacgccaagagtta
tttgagcacatattgcatttacccgtttcttttcatgacaaaaactcaacaggcgattta
atttcaaaaatcacttttgacacagagcaagttcaacaagcaattactaaagcgttactt
attgttgtacgtgaaggggcctttgttgtctttttacttggtgtaatgttttataccagt
tggaagctctcacttatatttttagtcatcatccctctcgttgccattattgtagcagtt
gtatcgaaacgttttcgccatatttctaaaagtatccaatcagctatggggcaggttaca
cgtagctctgaacaaatgcttagcggacataaagttattcatggatttggcggacaagac
caagaaataaaccatttctcaaagattaataatcataaccgccagcagcgcattaaaatg
gatgcgacaaaagctttaagtgtatcaattattcaaatattagctgccagtgccatggct
gttattttatgggctgtatctcttccatcaatgattgatacgattacctctggtgacttc
atggcattaattgcctcaatgatgatgctattgcgaccgctaaaacaactcgctaatgtt
aatagtgatatgcagcgtggtatctctgctgcacaaagtatatttttagttttagatgaa
gaaatggaaaaagatactggcaccgtttcagtcgataaagttaaagggttaattgaagtt
aaaaatgtaacttttaagtacccaacaaaagatgaagccgtattaaacgatttgtcgcta
acgattaaagcgggtgaaagtattgccttagtagggcgctcaggctcgggtaaatcaaca
atttctaatttattaccacgctactatgacctagagttaccgagtgaaatattacttgat
ggtatagccctgcaggattataaattaacagatttgcgtcgccagtttgctttagtgtct
cagcaggtcgtgttatttaacgatacgattgctaacaatatttgttatggcataaagcat
gatgtgtctgagaaagaattagagcaagttgctaaacaagcgcatgtttgggagtttgtt
aaagacctgccagagcaattaaacaccatggtaggtgaaaatggtgtaatgctctccggc
ggtcaacgtcagcgtatagcgatagcacgtgcaatattaaaagacgcacctattttgatt
ttagacgaggcaacatcagcacttgataccgaatctgaaaagcttattcagcaagcatta
gaaacgctaatgaaagataaaacctcaattgttattgcgcatcgcttatctacaatcgaa
aacagtgaccgaatctatgttattgataatggtcgtgtaatagaaagtggcgatcacaat
agcttattagcaaatgacggtacttattcagccctttgtaaaatgcagtttggtgatcag
gcgtga
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