Pseudoalteromonas sp. LC2018020214: JG479_08900
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Entry
JG479_08900 CDS
T10970
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc00520
Amino sugar and nucleotide sugar metabolism
pslc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
JG479_08900
Enzymes [BR:
pslc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
JG479_08900
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF5005
Glyco_hydro_32N
Motif
Other DBs
NCBI-ProteinID:
QQM62885
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Position
1:2015674..2017284
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AA seq
536 aa
AA seq
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MSMLQNPILRGFNPDPNIVRVNNDYYIATSTFEWFGGVQIHHSTDLVNWRVIGQALNTVE
QLDMRGVPDSCGVWAPQLSYNNGRFYLVYTNVKSFDGPYKDTPNYFVSTTDITGNWSQAT
YLNSSGFDPSIFHDDDGKSYLLNMLVDHRNNALFGGIVMQELCLKTNKLIGDVKPIFSGT
KLGCTEGPHILKRGAYYYLITAEGGTGYEHCISVARSKNVFGPYQVHPHNPVITAAHEPS
NTLQKCGHGDFFQTQAGDWYTVFLTSRPLTERGRCITGRETGIEQIIWKDDDWPYAKHTN
KAPRIHVPVEGLTLNPQPQPTTHIDFSKDDLTVDFQSLRIPMCKSWVYKNTQKASLTLLG
KESLSSLHQQSFIARRVQAHHTVSSTCVDFAPSSFQQMAGLVCYYNTAHYYYLHISGGDV
GDEATPRYLNILSCDKYQTSTPVAPLLLKTNKPVYLKADFNGAQLQFYYATEKNCWIKFG
PVLDGSILSDDYVQQSPQGYRPCFTGAFVGMACQDLSGQNKEAHYSFFNYDEPSDE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgctgcaaaacccaattctaagaggctttaacccagacccaaacattgtcaga
gttaataacgattactacatagccacttcaacatttgaatggtttggcggtgtgcaaatt
caccactctaccgatttagtaaattggcgagttataggccaagcacttaacaccgtagag
caactcgatatgcgaggagtacccgactcttgcggcgtatgggcaccgcaacttagttac
aataatggccgtttttatttggtatataccaatgtaaaaagctttgatggcccttacaaa
gacacaccaaactattttgtatcaaccactgatattaccggtaactggtcacaagcgact
tacttaaactctagcggttttgatccgtctatttttcacgatgatgacggtaaaagctat
ttgctaaacatgttggttgatcaccgcaacaacgcactatttggtggcatagtaatgcaa
gagctttgcctaaaaaccaataagttaataggcgatgttaaacctatattttcaggcaca
aaacttggttgcactgaaggcccacatattttaaaacgcggtgcttactactatttaatt
accgctgaaggtggcactgggtatgaacactgcattagtgttgcgcgctctaaaaacgta
tttggcccttaccaagtacacccgcacaaccccgttattacagcagcccacgagccgagt
aatacgctacaaaaatgtggccatggagatttttttcaaacgcaagccggtgattggtac
acggtatttttaacatctagaccactgactgagcgtggccgctgcattacagggcgtgaa
acagggattgagcaaataatctggaaagacgatgactggccttatgccaaacacacaaat
aaagccccgagaatacacgtacccgttgaaggtttaacgctaaacccacagccgcaacct
acaacacatattgattttagtaaagatgatctgactgttgattttcagtcattgcgtata
cccatgtgcaaaagctgggtgtataaaaacactcaaaaagcatcgcttaccctactaggt
aaagagtctttaagctcattgcatcagcaaagttttattgccaggcgtgtacaggctcat
catactgttagcagcacatgcgttgattttgcaccaagcagttttcaacaaatggcgggg
ctagtatgttattacaacaccgcgcattactactatttgcatataagcggcggcgatgta
ggtgatgaagccacaccgcgttatttaaatatactaagctgcgataaataccaaacaagc
acgcctgttgcaccgcttttgcttaaaacaaacaaacctgtttacttaaaagctgatttt
aatggcgcgcagctacagttttattatgccaccgagaaaaactgctggataaagtttggc
ccagtgctcgatggcagcattttatctgatgattacgtgcagcaatcaccgcaagggtat
cgcccgtgttttaccggcgcttttgttggtatggcctgccaagacttatcgggacaaaat
aaagaagctcactattcattttttaattatgacgaacctagcgacgaataa
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