Pseudoalteromonas sp. LC2018020214: JG479_09405
Help
Entry
JG479_09405 CDS
T10970
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc02020
Two-component system
pslc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JG479_09405
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JG479_09405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pslc03000
]
JG479_09405
Transcription factors [BR:
pslc03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
JG479_09405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
HTH_24
HTH_3
wHTH-PRTase_assc
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
QQM62984
LinkDB
All DBs
Position
1:complement(2134100..2134774)
Genome browser
AA seq
224 aa
AA seq
DB search
MTPQQQNVIEQGHWFKNRSAYLKSFLLTQGKTLSLKAQQSLFLRGDKHDGIYAVLSGVVR
ISGVSNEGKEAVLSFIDSSLWFGEVTLFDGGLRTHDVYAQTDVVLFYVPQRELEQLLNKQ
PQYWQEFGLLLAQKLRLMFTSMEDHALLSAEQKVCNRLLMLSEHTEHLTPLVLSQQQLAD
MTYLTRQTINQILQQLVSLQAISLGYQRITVLDKQKLQARATQA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgactccacagcagcaaaacgtaatagagcaagggcattggtttaaaaaccgtagcgct
tatttaaaaagttttttactaacgcagggcaaaacgctctcgctaaaagctcagcaatca
ttatttttgcgaggtgataagcacgatggaatttatgcagtgcttagcggcgttgtgcgt
attagtggcgtaagtaacgaaggcaaagaagctgtattgagctttattgattcatcactg
tggtttggcgaagttaccttatttgatggtggcctgcgcactcatgatgtatatgcacaa
actgatgttgtgcttttttacgtgccccaacgcgagcttgaacagctattaaacaagcag
ccacaatattggcaggagtttggtttattgttggcacaaaagttacgcctaatgtttacc
tcaatggaagatcacgcattactaagcgctgagcaaaaagtatgcaatcgacttttaatg
ctcagcgagcatacagagcacttaacaccacttgttttatctcagcagcaacttgctgat
atgacctacctaacgcgccaaactattaatcaaatactgcaacagcttgttagcttacaa
gctattagtttggggtatcaacgcataacagttttagataaacaaaagctacaggcgcgt
gctacacaagcttaa
DBGET
integrated database retrieval system
