Pseudoalteromonas sp. LC2018020214: JG479_09730
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Entry
JG479_09730 CDS
T10970
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc00220
Arginine biosynthesis
pslc00240
Pyrimidine metabolism
pslc00250
Alanine, aspartate and glutamate metabolism
pslc01100
Metabolic pathways
pslc01110
Biosynthesis of secondary metabolites
pslc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JG479_09730 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JG479_09730 (carB)
00220 Arginine biosynthesis
JG479_09730 (carB)
Enzymes [BR:
pslc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
JG479_09730 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
RimK
CoA_binding_2
ATP-grasp_2
GSH-S_ATP
Epimerase
Motif
Other DBs
NCBI-ProteinID:
QQM63043
LinkDB
All DBs
Position
1:complement(2212844..2216062)
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AA seq
1072 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVEKIIEKEKPDAVLPTMGGQTALNCALDLDKHGVLAKHGVELIGATA
DAIDKAENRERFDVAMKNIGLECPRAEIAHSMEEAKDTMSRIGLPCIIRPSFTMGGTGGG
VAYNMEEFEEICERGLDLSPTNELLIDESLIGWKEYETEVVRDKNDNCIIVCTIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPEDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLHKALRGLEVGATGFNPIVALDDPKA
KEKIIRELREPGAERIWYIADAMRHGMSVDDVYELTKVNRWFLVQIEDILKDEAKIGEVG
MAGLNADFLRKLKRKGFADPRIAEIAGVSEAEIRKKRHLLNIVPVYKRVDTCAAEFSSDT
AYMYSSYDEECEANPTDKDKIMVIGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPITLEDVLEIVRVEKPKGVIVQYGGQTPLKLARELEANGVPV
IGTSPDAIDRAEDRERFQQLVERLNLLQPENATVTSTEEALLKSVEIGFPLVVRPSYVLG
GRAMEIVYDEDDLRRYMTEAVSASNEAPVLLDRFLDNAIEVDVDAICDGEQVIIGGIMEH
IEQAGVHSGDSACSLPAHSLSQEVQDVMRKQVTDMALELGVVGLMNTQFAVKDGKVYLIE
VNPRAARTVPFVSKATGVALAKVAARCMAGQSLASQGITKEVIPPYYSVKEVVLPFAKFQ
GVDPIRGPEMRSTGEVMGVGDTFAEAFAKAQLGASNTLPRGGRALLSVRNSDKPRIVELA
KIMTDLGFELDATGGTAQALEEAGIEVRRVNKVYEGRPHILDYIKNKEYSYIVNTTEGRQ
AIEDSKVLRRGALQNKTNYTTTLNAAFANCTANKADDRSKVTSVQELHLRLN
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtaccgacataaaaagcattcttatcttaggcgcaggcccaattgtaatt
ggtcaagcttgtgaatttgactactctggtgctcaagcgtgtaaagcacttagagaagaa
ggctatagagttatattagttaactcaaaccctgcaactatcatgaccgatcctgaaatg
gccgatgctacctacatcgaaccaattcactgggaagtggtagaaaaaattattgaaaaa
gaaaagccagatgcagtattgcctacaatgggtggtcaaacagcattaaactgtgcactt
gatttagacaagcatggtgtattggctaagcacggcgttgagctaattggtgcaacggcg
gatgcaatcgacaaagcagaaaatcgtgaacgctttgacgtagcaatgaaaaacattggc
cttgaatgtcctcgtgctgaaattgctcactcaatggaagaagctaaagatacaatgagc
cgaattggcttaccatgtatcattcgtccttctttcaccatgggtggcaccggtggcggt
gttgcttacaacatggaagagtttgaagaaatttgtgaacgtggtttagacttatcgcca
acaaacgaattattgattgatgaatcactgattggttggaaagagtacgaaacagaagtt
gtacgtgataaaaatgataactgtattattgtttgtaccattgaaaactttgaccctatg
ggtgttcacactggcgattcaatcaccgttgcaccagcgcaaacgctaaccgacaaagaa
taccaaattatgcgtaacgcctctatggcggtattacgtgaaattggtgtagaaactggc
ggttctaacgtgcagtttggtattaatcctgaagatggccgcatggttatcattgagatg
aacccacgtgtatcacgttcatctgcacttgcatcaaaagcaacgggtttcccaattgct
aaaattgctgcaaagctagcagtaggttacacgcttgacgagcttcaaaacgatattact
ggcggtaaaactccagcatcttttgagccttcaatcgattacgttgtaacaaaaattcct
cgctttaactttgaaaaatttgcaggtgcgaacgaccgtttaactacgcaaatgaaatcg
gttggcgaagtaatggcgattggtcgtaaccaacaagaatcattacacaaagcattacgt
ggtcttgaagtgggcgcaacaggttttaacccaatagttgcacttgatgaccctaaagcg
aaagaaaaaatcatccgcgaattacgcgagccaggtgctgagcgtatctggtacattgcc
gatgcaatgcgccatggtatgagcgttgatgatgtttatgagctgactaaagttaatcgc
tggttcttagtacaaatagaagatattttaaaagacgaagcaaaaattggtgaagtaggt
atggctggtttaaatgccgacttcctacgtaaacttaaacgcaaaggtttcgcagaccca
cgtatagctgaaattgctggtgtatctgaagctgaaattcgtaaaaaacgtcacctatta
aacatcgtgccagtatacaaacgtgttgatacgtgcgctgcagaatttagctcagacaca
gcttacatgtactcatcttacgatgaagagtgtgaagcaaacccaacagataaagacaaa
atcatggttattggtggcggtcctaaccgtatcggccaaggtattgaatttgattactgt
tgtgtacatgcctcgcttgcgcttcgcgaagacggctatgaaaccattatggttaactgt
aaccctgaaacggtttctaccgattacgatacatctgatagactatactttgagccaatt
acacttgaagacgtacttgaaatcgtacgtgttgaaaagccaaaaggcgttattgtgcag
tacggtggtcaaacaccacttaaattagcacgtgagcttgaagcgaatggcgtgccagta
attggtacttcacctgatgcgattgaccgtgcagaagaccgcgaacgtttccaacaactt
gtagagcgtttaaatttacttcagccagaaaatgcaacagtaacttcaactgaagaagca
ctacttaaatcagttgaaattggttttccactcgttgtacgtccgtcgtatgtactaggt
ggtcgtgcaatggaaattgtatacgatgaagacgatttacgtcgctacatgaccgaagct
gtatctgcatcaaacgaagcacctgtattactggaccgtttcttagataacgcaattgaa
gttgacgttgacgcaatttgcgacggcgagcaagtaattattggcggtatcatggagcac
attgagcaagccggtgttcactctggtgactcagcatgttcattaccagcacattcttta
tcgcaagaagtgcaagatgtaatgcgcaagcaagtaaccgatatggcgcttgagcttggt
gttgttggcttaatgaatacacagtttgctgtaaaagatggcaaagtgtacttaattgaa
gtcaacccacgtgcagctcgtactgtaccgtttgtatcaaaagcaaccggtgtagcgctt
gcaaaagtagctgctcgttgtatggcgggtcagtctttggcaagccaaggtatcactaaa
gaagtgatccctccttattacagcgttaaagaagttgttttaccatttgctaagtttcag
ggtgtggatccaattcgtggccctgagatgcgctcaacgggtgaagtgatgggtgttggt
gatactttcgccgaagcattcgcaaaagcacaattaggtgcaagcaacactttaccacgc
ggtggtcgcgcgttattatctgttcgtaatagcgataagccacgcattgttgaattagcc
aagattatgaccgacttaggttttgaacttgacgcaacgggtggcacggcacaagctctt
gaagaagctggcattgaagtacgacgtgtaaacaaagtatatgaaggccgcccgcatatt
cttgattatatcaagaataaagagtacagctatatcgttaataccaccgaaggtcgccaa
gcgatcgaagattcgaaggtgttacgtcgtggtgcattgcaaaataaaaccaactatacg
acaaccttgaacgcggcttttgctaactgtactgctaacaaagcagatgaccgtagtaaa
gtaacgtcagttcaagagctacacctgcgattgaactaa
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