Pseudoalteromonas sp. LC2018020214: JG479_11095
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Entry
JG479_11095 CDS
T10970
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pslc03016
]
JG479_11095 (truB)
Enzymes [BR:
pslc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JG479_11095 (truB)
Transfer RNA biogenesis [BR:
pslc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JG479_11095 (truB)
Prokaryotic type
JG479_11095 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QQM63276
LinkDB
All DBs
Position
1:complement(2499386..2500345)
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AA seq
319 aa
AA seq
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MAKRSKGRAVDGILLLNKPQGISSNKALQQAKGVYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYIVRAKLGERTTTSDSDGEIVSTKDVNVTREQLTKEIAAFVGESDQ
YPSMYSALKYQGRPLYKYAREGIEVPRKCRKINVFSLSFDEFDEQNNVLQMTAHVSKGTY
IRTIVDDLGENLGCGAHVIMLHRTAVGQYPADKMVSLDEIEALLAKAKAEELAPSTYLDS
LLLPIDTALTDLPVIEISKEQGKVFSHGQAVELPEALSEGAIKVVADGVFIGTGERNSSG
HLKVKRGLASQQDDYVKPE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcagtaaaggccgtgcagttgacggtattttgttgttaaacaaaccgcaa
ggcatttcatcaaataaagcactgcagcaagcgaaaggtgtttattttgcacaaaaagct
ggccacactggggctttagacccgcttgctacaggtatgctgccaatttgttttggtgag
gcgactaagtttacgcagtttttactcgatacagataaaacctatattgttcgtgcaaaa
ctgggtgagcgtacaacgacatcagattctgatggcgaaatcgtaagcacgaaagatgtg
aatgtgacgcgtgagcagttaacaaaagaaattgcagcttttgttggtgagtcagatcaa
tatccatcaatgtactcagcacttaagtatcaaggtagaccattatataagtacgcacga
gagggtattgaagtccctcgtaaatgcagaaaaataaatgtgtttagcttatcgtttgac
gaatttgatgaacaaaacaacgtattacaaatgacggctcatgtatcaaaagggacgtat
attcgtacaatcgttgatgatttgggcgaaaacctagggtgtggcgcacacgttataatg
cttcacagaactgctgttggtcagtatccggcagataaaatggtttcgcttgatgaaatt
gaagcgttgcttgctaaagcgaaagcagaagagcttgcgccttctacttatttagactcg
ttgttattacctatagacactgctttaactgatttacctgttattgaaatttcgaaagag
cagggcaaagtatttagtcatgggcaagcagtcgagttaccagaagctttatctgagggg
gcaattaaagttgttgcggatggtgtgtttattggtactggcgagcgcaactcaagtggc
catttaaaggttaaacgtggtcttgctagccagcaagatgattacgtaaagcctgaataa
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